SHOGoiN Cell Methylome: GSM1147609

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1147609


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7010000000000000000000-769Sequence Read ArchiveSRP023116SRP023116_M26Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencingMethylomeMale pronucleus (Zygote)MouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000084048 Gm12042 predicted gene 12042 5.5655 0.0000
2 ENSMUSG00000112677 Gm48868 predicted gene, 48868 5.5546 0.0000
3 ENSMUSG00000085936 2610307P16Rik RIKEN cDNA 2610307P16 gene 5.4290 0.0000
4 ENSMUSG00000103095 Gm37557 predicted gene, 37557 5.3576 0.0000
5 ENSMUSG00000082871 Gm13263 predicted gene 13263 5.2854 0.0000
6 ENSMUSG00000062190 Lancl2 LanC (bacterial lantibiotic synthetase component C)-like 2 5.2095 0.0000
7 ENSMUSG00000057037 Cfhr1 complement factor H-related 1 5.0986 0.0000
8 ENSMUSG00000087345 Gm13746 predicted gene 13746 5.0875 0.0000
9 ENSMUSG00000020100 Slc29a3 solute carrier family 29 (nucleoside transporters), member 3 5.0444 0.0000
10 ENSMUSG00000031651 Triml1 tripartite motif family-like 1 5.0000 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000022174 Dad1 defender against cell death 1 -5.0000 0.0000
50853 ENSMUSG00000005069 Pex5 peroxisomal biogenesis factor 5 -5.0000 0.0003
50852 ENSMUSG00000045639 Zfp629 zinc finger protein 629 -4.9999 0.0000
50851 ENSMUSG00000102463 1700003N22Rik RIKEN cDNA 1700003N22 gene -4.9967 0.0000
50850 ENSMUSG00000058600 Rpl30 ribosomal protein L30 -4.9965 0.0002
50849 ENSMUSG00000044726 Erich5 glutamate rich 5 -4.9965 0.0002
50848 ENSMUSG00000021264 Yy1 YY1 transcription factor -4.9960 0.0000
50847 ENSMUSG00000096458 Moap1 modulator of apoptosis 1 -4.9949 0.0000
50846 ENSMUSG00000024190 Dusp1 dual specificity phosphatase 1 -4.9924 0.0000
50845 ENSMUSG00000019878 Hsf2 heat shock factor 2 -4.9904 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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