SHOGoiN Cell Methylome: GSM1200273
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1200273 Profile download | 5090101000001000000000-236 | Sequence Read Archive | SRP023116 | SRP023116_M29 | Single cell methylome landscapes of mouse embryonic stem cells and early embryos analyzed by reduced representation bisulfite sequencing | Methylome | Sperm | Mouse | Genitalia | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000030996 | Art1 | ADP-ribosyltransferase 1 | 5.9386 | 0.0000 |
| 2 | ENSMUSG00000070424 | Art5 | ADP-ribosyltransferase 5 | 5.9386 | 0.0000 |
| 3 | ENSMUSG00000003546 | Klc4 | kinesin light chain 4 | 5.7137 | 0.0000 |
| 4 | ENSMUSG00000105291 | Gm18901 | predicted gene, 18901 | 5.6147 | 0.0000 |
| 5 | ENSMUSG00000105309 | Gm21461 | predicted gene, 21461 | 5.5850 | 0.0000 |
| 6 | ENSMUSG00000031927 | 1700012B09Rik | RIKEN cDNA 1700012B09 gene | 5.5698 | 0.0000 |
| 7 | ENSMUSG00000067610 | Klri1 | killer cell lectin-like receptor family I member 1 | 5.5691 | 0.0000 |
| 8 | ENSMUSG00000009585 | Apobec3 | apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 | 5.5546 | 0.0000 |
| 9 | ENSMUSG00000064550 | Gm24623 | predicted gene, 24623 | 5.4131 | 0.0000 |
| 10 | ENSMUSG00000105871 | Gm43147 | predicted gene 43147 | 5.4131 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000002227 | Mov10 | Moloney leukemia virus 10 | -4.4394 | 0.0000 |
| 50853 | ENSMUSG00000107037 | Gm29793 | predicted gene, 29793 | -4.4371 | 0.0000 |
| 50852 | ENSMUSG00000057157 | Gm6054 | predicted gene 6054 | -4.4371 | 0.0000 |
| 50851 | ENSMUSG00000060961 | Slc4a4 | solute carrier family 4 (anion exchanger), member 4 | -4.4370 | 0.0000 |
| 50850 | ENSMUSG00000025909 | Sntg1 | syntrophin, gamma 1 | -4.4325 | 0.0000 |
| 50849 | ENSMUSG00000089450 | Gm24225 | predicted gene, 24225 | -4.4307 | 0.0000 |
| 50848 | ENSMUSG00000032370 | Lactb | lactamase, beta | -4.4307 | 0.0000 |
| 50847 | ENSMUSG00000046230 | Vps13a | vacuolar protein sorting 13A | -4.4303 | 0.0000 |
| 50846 | ENSMUSG00000038954 | Supt3 | suppressor of Ty 3 | -4.4245 | 0.0000 |
| 50845 | ENSMUSG00000089427 | Gm26005 | predicted gene, 26005 | -4.4219 | 0.0000 |
