SHOGoiN Cell Methylome: GSM1370522

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370522


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M1Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 4.1699 0.0000
2 ENSMUSG00000078656 Vps25 vacuolar protein sorting 25 2.5850 0.0000
3 ENSMUSG00000082994 Gm11848 predicted gene 11848 2.5850 0.0001
4 ENSMUSG00000084246 Gm15162 predicted gene 15162 2.5850 0.0000
5 ENSMUSG00000109354 Olfr706 olfactory receptor 706 2.5850 0.0001
6 ENSMUSG00000043308 Vmn1r75 vomeronasal 1 receptor 75 2.3219 0.0000
7 ENSMUSG00000053678 Defb40 defensin beta 40 2.3219 0.0006
8 ENSMUSG00000082520 Gm13349 predicted gene 13349 2.3219 0.0000
9 ENSMUSG00000085533 Gm12146 predicted gene 12146 2.3219 0.0006
10 ENSMUSG00000094820 Gm23805 predicted gene, 23805 2.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000066938 Gm10190 predicted gene 10190 -1.7516 0.0000
50853 ENSMUSG00000107747 Gm5881 predicted gene 5881 -1.7500 0.3785
50852 ENSMUSG00000081018 Gm15012 predicted gene 15012 -1.7500 0.3785
50851 ENSMUSG00000073960 Olfr583 olfactory receptor 583 -1.7500 0.3785
50850 ENSMUSG00000073386 9830107B12Rik RIKEN cDNA 9830107B12 gene -1.7500 0.3785
50849 ENSMUSG00000063320 1190007I07Rik RIKEN cDNA 1190007I07 gene -1.7500 0.0107
50848 ENSMUSG00000075719 Gm23741 predicted gene, 23741 -1.7486 0.1494
50847 ENSMUSG00000039770 Ypel5 yippee like 5 -1.7443 0.0066
50846 ENSMUSG00000076456 Mir760 microRNA 760 -1.7436 0.0000
50845 ENSMUSG00000057359 Gm17494 predicted gene, 17494 -1.7436 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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