Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370523

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370523


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M2Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000063656 Gm10135 predicted gene 10135 2.8774 0.0000
3 ENSMUSG00000103912 Gm33819 predicted gene, 33819 2.8074 0.0000
4 ENSMUSG00000110865 Gm47046 predicted gene, 47046 2.8074 0.0000
5 ENSMUSG00000042938 Gm14117 predicted gene 14117 2.6455 0.0000
6 ENSMUSG00000081439 Gm7840 predicted gene 7840 2.6055 0.0000
7 ENSMUSG00000060701 Fpr-rs3 formyl peptide receptor, related sequence 3 2.5850 0.0000
8 ENSMUSG00000064477 Gm23404 predicted gene, 23404 2.5850 0.0001
9 ENSMUSG00000074284 Gm10658 predicted gene 10658 2.5850 0.0001
10 ENSMUSG00000075107 Olfr1216 olfactory receptor 1216 2.5850 0.0001
47072 ENSMUSG00000049515 Espnl espin-like -1.5382 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000028109 Hormad1 HORMA domain containing 1 -1.5387 0.1752
47080 ENSMUSG00000102822 1700113B19Rik RIKEN cDNA 1700113B19 gene -1.5386 0.0628
47079 ENSMUSG00000088810 Gm22382 predicted gene, 22382 -1.5386 0.0397
47078 ENSMUSG00000082566 Gm11485 predicted gene 11485 -1.5385 0.0173
47077 ENSMUSG00000020830 Vmo1 vitelline membrane outer layer 1 homolog (chicken) -1.5384 0.0000
47076 ENSMUSG00000034031 Ccdc182 coiled-coil domain containing 182 -1.5384 0.0013
47075 ENSMUSG00000039904 Gpr37 G protein-coupled receptor 37 -1.5383 0.0001
47074 ENSMUSG00000022241 Tars threonyl-tRNA synthetase -1.5383 0.0356
47073 ENSMUSG00000021219 Rgs6 regulator of G-protein signaling 6 -1.5383 0.0000
47072 ENSMUSG00000049515 Espnl espin-like -1.5382 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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