SHOGoiN Cell Methylome: GSM1370524

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370524


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M3Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000084326 Gm12820 predicted gene 12820 2.6598 0.0000
2 ENSMUSG00000091669 Gm17117 predicted gene 17117 2.5850 0.0000
3 ENSMUSG00000100476 Nanog-ps2 Nanog pseudogene 2 2.5850 0.0001
4 ENSMUSG00000108164 Gm43899 predicted gene, 43899 2.5850 0.0001
5 ENSMUSG00000111627 Gm48749 predicted gene, 48749 2.5850 0.0000
6 ENSMUSG00000112019 Gm48748 predicted gene, 48748 2.5850 0.0000
7 ENSMUSG00000104479 Gm10305 predicted gene 10305 2.5538 0.0000
8 ENSMUSG00000050299 Gm9843 predicted gene 9843 2.4642 0.0000
9 ENSMUSG00000080574 Mir466i microRNA 466i 2.4534 0.0000
10 ENSMUSG00000069421 Olfr810 olfactory receptor 810 2.3978 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000092411 Gm5594 predicted gene 5594 -2.0000 1.0000
50853 ENSMUSG00000082185 Gm12428 predicted gene 12428 -2.0000 1.0000
50852 ENSMUSG00000080894 Defa-ps15 defensin, alpha, pseudogene 15 -2.0000 1.0000
50851 ENSMUSG00000080410 Gm26472 predicted gene, 26472 -2.0000 0.6012
50850 ENSMUSG00000079432 Gm15023 predicted gene 15023 -2.0000 1.0000
50849 ENSMUSG00000074441 Gm15292 predicted gene 15292 -2.0000 0.6012
50848 ENSMUSG00000073965 Olfr568 olfactory receptor 568 -2.0000 0.6012
50847 ENSMUSG00000073835 Mup-ps12 major urinary protein, pseudogene 12 -2.0000 1.0000
50846 ENSMUSG00000072931 Gm15080 predicted gene 15080 -2.0000 0.2348
50845 ENSMUSG00000071613 Gm10340 predicted gene 10340 -2.0000 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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