SHOGoiN Cell Methylome: GSM1370525

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370525


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M4Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000104093 A330015K06Rik RIKEN cDNA A330015K06 gene 2.5850 0.0001
2 ENSMUSG00000105001 Gm47275 predicted gene, 47275 2.3555 0.0000
3 ENSMUSG00000083490 Gm14940 predicted gene 14940 2.3219 0.0005
4 ENSMUSG00000098085 Gm8919 predicted gene 8919 2.3219 0.0005
5 ENSMUSG00000100632 9430060I03Rik RIKEN cDNA 9430060I03 gene 2.3219 0.0000
6 ENSMUSG00000103706 6820402A03Rik RIKEN cDNA 6820402A03 gene 2.3219 0.0000
7 ENSMUSG00000031197 Vbp1 von Hippel-Lindau binding protein 1 2.1610 0.0000
8 ENSMUSG00000106058 Gm43013 predicted gene 43013 2.0047 0.0000
9 ENSMUSG00000025939 Ube2w ubiquitin-conjugating enzyme E2W (putative) 2.0000 0.0000
10 ENSMUSG00000034732 Pabpc5 poly(A) binding protein, cytoplasmic 5 2.0000 0.0034

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000024598 Fbn2 fibrillin 2 -1.6822 0.0000
50853 ENSMUSG00000086711 Gm15482 predicted gene 15482 -1.6796 0.0003
50852 ENSMUSG00000026220 Slc16a14 solute carrier family 16 (monocarboxylic acid transporters), member 14 -1.6729 0.0000
50851 ENSMUSG00000112327 Gm36827 predicted gene, 36827 -1.6667 0.6041
50850 ENSMUSG00000106342 Gm42891 predicted gene 42891 -1.6667 0.6041
50849 ENSMUSG00000106258 Rpl7a-ps7 ribosomal protein L7A, pseudogene 7 -1.6667 0.6041
50848 ENSMUSG00000106118 Gm18038 predicted gene, 18038 -1.6667 0.6041
50847 ENSMUSG00000105588 Utp14b-ps1 UTP14B small subunit processome component, pseudogene 1 -1.6667 0.6041
50846 ENSMUSG00000102203 4930412E21Rik RIKEN cDNA 4930412E21 gene -1.6667 0.6041
50845 ENSMUSG00000100515 Gm17916 predicted gene, 17916 -1.6667 0.3723

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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