SHOGoiN Cell Methylome: GSM1370527

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370527


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M6Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000086244 4930558G05Rik RIKEN cDNA 4930558G05 gene 2.5850 0.0001
2 ENSMUSG00000095097 Gm23658 predicted gene, 23658 2.5850 0.0000
3 ENSMUSG00000096386 Vmn1r100 vomeronasal 1 receptor 100 2.5850 0.0001
4 ENSMUSG00000104890 Mir3084-1 microRNA 3084-1 2.5850 0.0000
5 ENSMUSG00000052217 Hbb-bh1 hemoglobin Z, beta-like embryonic chain 2.3219 0.0005
6 ENSMUSG00000078621 Hbb-bh2 hemoglobin beta, bh2 2.3219 0.0005
7 ENSMUSG00000081033 Gm14797 predicted gene 14797 2.3219 0.0005
8 ENSMUSG00000085481 Gm16304 predicted gene 16304 2.3219 0.0000
9 ENSMUSG00000099960 Gm28590 predicted gene 28590 2.3219 0.0005
10 ENSMUSG00000102925 Gm37150 predicted gene, 37150 2.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000065660 n-R5s170 nuclear encoded rRNA 5S 170 -1.9814 0.1519
50853 ENSMUSG00000105459 4930449I04Rik RIKEN cDNA 4930449I04 gene -1.9809 0.0000
50852 ENSMUSG00000065884 Gm22864 predicted gene, 22864 -1.9793 0.0005
50851 ENSMUSG00000091900 Gm4353 predicted gene 4353 -1.9788 0.0045
50850 ENSMUSG00000085281 Gm13316 predicted gene 13316 -1.9767 0.2356
50849 ENSMUSG00000102817 Gm6185 predicted gene 6185 -1.9733 0.0000
50848 ENSMUSG00000082968 Gm14581 predicted gene 14581 -1.9727 0.0764
50847 ENSMUSG00000106562 Gm5981 predicted gene 5981 -1.9718 0.0000
50846 ENSMUSG00000095193 Gm20939 predicted gene, 20939 -1.9709 0.0069
50845 ENSMUSG00000065658 Gm23102 predicted gene, 23102 -1.9709 0.0069

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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