Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370528

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1370528 Profile download	5030203000000000000000-761	Sequence Read Archive	SRP041257	SRP041257_M7	Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity	Methylome	Secondary oocyte (Ovarian follicle)	Mouse	Genitalia	Bisulfite-Seq (WGBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000004542	Psg19	pregnancy specific glycoprotein 19	2.0000	0.0032
2	ENSMUSG00000049882	Vcpkmt	valosin containing protein lysine (K) methyltransferase	2.0000	0.0032
3	ENSMUSG00000082540	Vmn1r-ps112	vomeronasal 1 receptor, pseudogene 112	2.0000	0.0032
5	ENSMUSG00000093385	A330044P14Rik	RIKEN cDNA A330044P14 gene	2.0000	0.0032
6	ENSMUSG00000096499	Ighv1-5	immunoglobulin heavy variable V1-5	2.0000	0.0000
9	ENSMUSG00000099611	Vmn1r189	vomeronasal 1 receptor 189	2.0000	0.0032
47072	ENSMUSG00000111364	Gm36745	predicted gene, 36745	-1.0000	1.0000
47073	ENSMUSG00000111369	Gm47043	predicted gene, 47043	-1.0000	1.0000
47074	ENSMUSG00000111371	Gm47162	predicted gene, 47162	-1.0000	1.0000
47075	ENSMUSG00000111374	Gm50490	predicted gene, 50490	-1.0000	1.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000111414	Gm18103	predicted gene, 18103	-1.0000	1.0000
47080	ENSMUSG00000111413	Gm47716	predicted gene, 47716	-1.0000	0.6036
47079	ENSMUSG00000111404	Gm47169	predicted gene, 47169	-1.0000	1.0000
47078	ENSMUSG00000111399	Gm47328	predicted gene, 47328	-1.0000	1.0000
47077	ENSMUSG00000111397	Gm48232	predicted gene, 48232	-1.0000	1.0000
47076	ENSMUSG00000111396	Gm7333	predicted gene 7333	-1.0000	1.0000
47075	ENSMUSG00000111374	Gm50490	predicted gene, 50490	-1.0000	1.0000
47074	ENSMUSG00000111371	Gm47162	predicted gene, 47162	-1.0000	1.0000
47073	ENSMUSG00000111369	Gm47043	predicted gene, 47043	-1.0000	1.0000
47072	ENSMUSG00000111364	Gm36745	predicted gene, 36745	-1.0000	1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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