SHOGoiN Cell Methylome: GSM1370528

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370528


Profile download
5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M7Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000004542 Psg19 pregnancy specific glycoprotein 19 2.0000 0.0032
2 ENSMUSG00000049882 Vcpkmt valosin containing protein lysine (K) methyltransferase 2.0000 0.0032
3 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 2.0000 0.0032
4 ENSMUSG00000088184 Gm23137 predicted gene, 23137 2.0000 0.0032
5 ENSMUSG00000093385 A330044P14Rik RIKEN cDNA A330044P14 gene 2.0000 0.0032
6 ENSMUSG00000096499 Ighv1-5 immunoglobulin heavy variable V1-5 2.0000 0.0000
7 ENSMUSG00000098357 Mir7094-2 microRNA 7094-2 2.0000 0.0000
8 ENSMUSG00000098943 Rnu3b1 U3B small nuclear RNA 1 2.0000 0.0032
9 ENSMUSG00000099611 Vmn1r189 vomeronasal 1 receptor 189 2.0000 0.0032
10 ENSMUSG00000105025 Rnu3b1 U3B small nuclear RNA 1 2.0000 0.0032

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000104282 Gm37460 predicted gene, 37460 -1.5850 1.0000
50853 ENSMUSG00000103829 Gm38174 predicted gene, 38174 -1.5850 1.0000
50852 ENSMUSG00000103747 Gm38236 predicted gene, 38236 -1.5850 1.0000
50851 ENSMUSG00000103517 Gm37432 predicted gene, 37432 -1.5850 1.0000
50850 ENSMUSG00000103228 Gm37727 predicted gene, 37727 -1.5850 1.0000
50849 ENSMUSG00000103151 Gm38292 predicted gene, 38292 -1.5850 1.0000
50848 ENSMUSG00000102263 Gm31415 predicted gene, 31415 -1.5850 1.0000
50847 ENSMUSG00000101961 Gm28220 predicted gene 28220 -1.5850 1.0000
50846 ENSMUSG00000101895 Gm28981 predicted gene 28981 -1.5850 1.0000
50845 ENSMUSG00000101817 Gm28288 predicted gene 28288 -1.5850 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...