SHOGoiN Cell Methylome: GSM1370529

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370529


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M8Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 4.7004 0.0000
2 ENSMUSG00000101031 Ms4a12 membrane-spanning 4-domains, subfamily A, member 12 2.5850 0.0001
3 ENSMUSG00000084706 Gm22987 predicted gene, 22987 2.5184 0.0000
4 ENSMUSG00000109354 Olfr706 olfactory receptor 706 2.3502 0.0000
5 ENSMUSG00000085856 Gm12050 predicted gene 12050 2.3219 0.0005
6 ENSMUSG00000081283 Vmn1r-ps104 vomeronasal 1 receptor, pseudogene 104 2.3023 0.0000
7 ENSMUSG00000064208 Gm10145 predicted gene 10145 2.1073 0.0000
8 ENSMUSG00000089987 Gpx2-ps1 glutathione peroxidase 2, pseudogene 1 2.0878 0.0000
9 ENSMUSG00000101014 Gm28289 predicted gene 28289 2.0060 0.0000
10 ENSMUSG00000060701 Fpr-rs3 formyl peptide receptor, related sequence 3 2.0000 0.0032

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000106591 Gm47286 predicted gene, 47286 -1.6750 0.0000
50853 ENSMUSG00000084950 Gm5577 predicted gene 5577 -1.6750 0.0000
50852 ENSMUSG00000044927 H1fx H1 histone family, member X -1.6750 0.0000
50851 ENSMUSG00000098932 Mir6410 microRNA 6410 -1.6748 0.0008
50850 ENSMUSG00000070697 Utp3 UTP3 small subunit processome component -1.6741 0.0028
50849 ENSMUSG00000094603 Gm25872 predicted gene, 25872 -1.6697 0.6721
50848 ENSMUSG00000110171 Olfr484 olfactory receptor 484 -1.6667 0.6037
50847 ENSMUSG00000106298 Gm42958 predicted gene 42958 -1.6667 0.2472
50846 ENSMUSG00000103320 Gm37403 predicted gene, 37403 -1.6667 0.0615
50845 ENSMUSG00000103061 Gm36970 predicted gene, 36970 -1.6667 0.3733

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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