SHOGoiN Cell Methylome: GSM1370530

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370530


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M9Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109354 Olfr706 olfactory receptor 706 4.3923 0.0000
2 ENSMUSG00000105566 Obox4-ps4 oocyte specific homeobox 4, pseudogene 4 3.0000 0.0000
3 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 2.8074 0.0000
4 ENSMUSG00000089307 Gm24843 predicted gene, 24843 2.5850 0.0001
5 ENSMUSG00000098115 Gm8816 predicted gene 8816 2.5850 0.0001
6 ENSMUSG00000082994 Gm11848 predicted gene 11848 2.3900 0.0000
7 ENSMUSG00000055430 Nap1l5 nucleosome assembly protein 1-like 5 2.3219 0.0000
8 ENSMUSG00000080903 Gm16383 predicted gene 16383 2.3219 0.0007
9 ENSMUSG00000082005 Gm7189 predicted pseudogene 7189 2.3219 0.0007
10 ENSMUSG00000098110 Gm26956 predicted gene, 26956 2.3219 0.0007

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000064494 Gm22063 predicted gene, 22063 -1.6667 0.6068
50853 ENSMUSG00000058904 Olfr1413 olfactory receptor 1413 -1.6667 0.6068
50852 ENSMUSG00000031885 Cbfb core binding factor beta -1.6667 0.6068
50851 ENSMUSG00000018589 Glra2 glycine receptor, alpha 2 subunit -1.6667 0.6068
50850 ENSMUSG00000039914 Coq10a coenzyme Q10A -1.6662 0.0000
50849 ENSMUSG00000101597 Gm5621 predicted gene 5621 -1.6660 0.0927
50848 ENSMUSG00000083212 Gm12274 predicted gene 12274 -1.6647 0.0041
50847 ENSMUSG00000043445 Pgp phosphoglycolate phosphatase -1.6635 0.0000
50846 ENSMUSG00000109371 Gm44626 predicted gene 44626 -1.6610 1.0000
50845 ENSMUSG00000100266 Gm5372 predicted gene 5372 -1.6610 0.3818

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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