SHOGoiN Cell Methylome: GSM1370531

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370531


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M10Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109100 Olfr1464-ps1 olfactory receptor 1464, pseudogene 1 2.5850 0.0000
2 ENSMUSG00000040370 Etfrf1 electron transfer flavoprotein regulatory factor 1 2.4534 0.0000
3 ENSMUSG00000025666 Tmem47 transmembrane protein 47 2.3219 0.0005
4 ENSMUSG00000084899 Gm15344 predicted gene 15344 2.3219 0.0005
5 ENSMUSG00000087224 Gm2182 predicted gene 2182 2.3219 0.0005
6 ENSMUSG00000091283 Gm17234 predicted gene 17234 2.3219 0.0000
7 ENSMUSG00000096535 Gm24755 predicted gene, 24755 2.3219 0.0005
8 ENSMUSG00000102525 Gm37784 predicted gene, 37784 2.3219 0.0005
9 ENSMUSG00000107613 Gm43927 predicted gene, 43927 2.3219 0.0005
10 ENSMUSG00000082687 Gm11474 predicted gene 11474 2.2154 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000060904 Arl1 ADP-ribosylation factor-like 1 -1.8622 0.0001
50853 ENSMUSG00000096851 Gm22756 predicted gene, 22756 -1.8617 0.2380
50852 ENSMUSG00000084873 C030047K22Rik RIKEN cDNA C030047K22 gene -1.8617 0.6136
50851 ENSMUSG00000026456 Cyb5r1 cytochrome b5 reductase 1 -1.8591 0.0005
50850 ENSMUSG00000099170 5730403I07Rik RIKEN cDNA 5730403I07 gene -1.8571 0.0169
50849 ENSMUSG00000092999 Gm23921 predicted gene, 23921 -1.8354 0.1217
50848 ENSMUSG00000109768 Gm45446 predicted gene 45446 -1.8340 0.2380
50847 ENSMUSG00000087993 Mir1982 microRNA 1982 -1.8340 0.2380
50846 ENSMUSG00000035242 Oaz1 ornithine decarboxylase antizyme 1 -1.8340 0.2380
50845 ENSMUSG00000106289 Trav23 T cell receptor alpha variable 23 -1.8306 0.4200

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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