SHOGoiN Cell Methylome: GSM1370532

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370532


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M11Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 5.4919 0.0000
2 ENSMUSG00000053678 Defb40 defensin beta 40 3.3219 0.0000
3 ENSMUSG00000022962 Gart phosphoribosylglycinamide formyltransferase 2.8074 0.0000
4 ENSMUSG00000002308 Cd320 CD320 antigen 2.5850 0.0001
5 ENSMUSG00000086020 Gm12239 predicted gene 12239 2.5850 0.0001
6 ENSMUSG00000104335 Gm38281 predicted gene, 38281 2.5850 0.0001
7 ENSMUSG00000084301 Gm7856 predicted gene 7856 2.3219 0.0000
8 ENSMUSG00000089589 Gm23343 predicted gene, 23343 2.3219 0.0006
9 ENSMUSG00000099741 Gm5253 predicted gene 5253 2.3219 0.0006
10 ENSMUSG00000107613 Gm43927 predicted gene, 43927 2.3219 0.0006

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000050730 Arhgap42 Rho GTPase activating protein 42 -1.9685 0.0000
50853 ENSMUSG00000025134 Alyref Aly/REF export factor -1.9655 0.0000
50852 ENSMUSG00000109028 Gm35842 predicted gene, 35842 -1.9534 0.2343
50851 ENSMUSG00000100887 Gm29297 predicted gene 29297 -1.9534 0.4941
50850 ENSMUSG00000100403 Gm21838 predicted gene, 21838 -1.9534 0.5989
50849 ENSMUSG00000103113 Gm37585 predicted gene, 37585 -1.9375 0.0395
50848 ENSMUSG00000082333 Gm11984 predicted gene 11984 -1.9358 0.3799
50847 ENSMUSG00000089705 Gm15970 predicted gene 15970 -1.9336 0.0047
50846 ENSMUSG00000060787 Olfr464 olfactory receptor 464 -1.9324 0.0639
50845 ENSMUSG00000077653 Gm23321 predicted gene, 23321 -1.9288 0.0974

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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