SHOGoiN Cell Methylome: GSM1370533

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370533


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M12Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109354 Olfr706 olfactory receptor 706 4.8074 0.0000
2 ENSMUSG00000105566 Obox4-ps4 oocyte specific homeobox 4, pseudogene 4 3.0000 0.0000
4 ENSMUSG00000103509 Gm38372 predicted gene, 38372 2.6340 0.0000
5 ENSMUSG00000107745 Gm43917 predicted gene, 43917 2.5850 0.0000
6 ENSMUSG00000089589 Gm23343 predicted gene, 23343 2.4594 0.0000
7 ENSMUSG00000088654 Gm24850 predicted gene, 24850 2.3900 0.0000
8 ENSMUSG00000081531 Vmn1r-ps113 vomeronasal 1 receptor, pseudogene 113 2.3219 0.0006
9 ENSMUSG00000093385 A330044P14Rik RIKEN cDNA A330044P14 gene 2.3219 0.0006
10 ENSMUSG00000110047 A230085B16Rik RIKEN cDNA A230085B16 gene 2.3219 0.0000
50845 ENSMUSG00000096583 Mir669a-1 microRNA 669a-1 -1.6667 0.6047

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000109646 Gm45523 predicted gene 45523 -1.6667 0.6047
50853 ENSMUSG00000109433 Olfr1435-ps1 olfactory receptor 1435, pseudogene 1 -1.6667 0.6047
50852 ENSMUSG00000106031 Gm8848 predicted gene 8848 -1.6667 0.6047
50851 ENSMUSG00000105546 Mir669a-4 microRNA 669a-4 -1.6667 0.6047
50850 ENSMUSG00000105324 Gm42705 predicted gene 42705 -1.6667 0.6047
50849 ENSMUSG00000104933 Mir466e microRNA 466e -1.6667 0.6047
50848 ENSMUSG00000104734 Mir669a-5 microRNA 669a-5 -1.6667 0.6047
50847 ENSMUSG00000104561 Mir466c-1 microRNA 466c-1 -1.6667 0.6047
50846 ENSMUSG00000096624 Mir467a-1 microRNA 467a-1 -1.6667 0.6047
50845 ENSMUSG00000096583 Mir669a-1 microRNA 669a-1 -1.6667 0.6047

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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