Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370538

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370538


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M16Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109354 Olfr706 olfactory receptor 706 5.4919 0.0000
2 ENSMUSG00000040370 Etfrf1 electron transfer flavoprotein regulatory factor 1 5.2479 0.0000
3 ENSMUSG00000102836 Gm37013 predicted gene, 37013 3.8074 0.0000
4 ENSMUSG00000103125 Gm37388 predicted gene, 37388 3.8074 0.0000
5 ENSMUSG00000103384 Gm37753 predicted gene, 37753 3.8074 0.0000
6 ENSMUSG00000103707 Pcdha6 protocadherin alpha 6 3.8074 0.0000
7 ENSMUSG00000104318 Pcdha7 protocadherin alpha 7 3.8074 0.0000
8 ENSMUSG00000047419 Cmya5 cardiomyopathy associated 5 3.3219 0.0000
9 ENSMUSG00000064570 Gm25800 predicted gene, 25800 3.0000 0.0000
10 ENSMUSG00000083668 Gm5648 predicted pseudogene 5648 2.8074 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000097259 Gm26766 predicted gene, 26766 -1.1328 0.0000
47080 ENSMUSG00000062397 Zfp706 zinc finger protein 706 -1.1328 0.0000
47079 ENSMUSG00000038893 Fam117a family with sequence similarity 117, member A -1.1326 0.0001
47078 ENSMUSG00000039804 Ncoa5 nuclear receptor coactivator 5 -1.1326 0.0000
47076 ENSMUSG00000062963 Ufc1 ubiquitin-fold modifier conjugating enzyme 1 -1.1322 0.0001
47075 ENSMUSG00000042745 Id1 inhibitor of DNA binding 1, HLH protein -1.1322 0.2791
47074 ENSMUSG00000035759 Bbs10 Bardet-Biedl syndrome 10 (human) -1.1322 0.0502
47072 ENSMUSG00000098302 Gm28039 predicted gene, 28039 -1.1321 0.1390
10 ENSMUSG00000083668 Gm5648 predicted pseudogene 5648 2.8074 0.0000
9 ENSMUSG00000064570 Gm25800 predicted gene, 25800 3.0000 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...