SHOGoiN Cell Methylome: GSM1370541

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370541


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M19Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 5.7004 0.0000
2 ENSMUSG00000109354 Olfr706 olfactory receptor 706 4.5236 0.0000
3 ENSMUSG00000100580 4933436I20Rik RIKEN cDNA 4933436I20 gene 3.4594 0.0000
4 ENSMUSG00000111180 Gm39348 predicted gene, 39348 3.1699 0.0000
5 ENSMUSG00000103384 Gm37753 predicted gene, 37753 2.5850 0.0000
6 ENSMUSG00000103707 Pcdha6 protocadherin alpha 6 2.5850 0.0000
7 ENSMUSG00000083425 Gm13992 predicted gene 13992 2.3219 0.0075
8 ENSMUSG00000097754 Ptgs2os2 prostaglandin-endoperoxide synthase 2, opposite strand 2 2.3219 0.0075
9 ENSMUSG00000097927 Gm6999 predicted gene 6999 2.3219 0.0075
10 ENSMUSG00000106712 Gm19649 predicted gene, 19649 2.3219 0.0075

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000106267 Gm40319 predicted gene, 40319 -1.7925 0.3307
50853 ENSMUSG00000103595 Gm37355 predicted gene, 37355 -1.7925 0.3307
50852 ENSMUSG00000098713 Rps2-ps5 ribosomal protein S2, pseudogene 5 -1.7925 0.1894
50851 ENSMUSG00000095632 Vmn1r175 vomeronasal 1 receptor 175 -1.7925 0.0056
50850 ENSMUSG00000094938 Gm23092 predicted gene, 23092 -1.7925 0.3307
50849 ENSMUSG00000086798 Gm16222 predicted gene 16222 -1.7925 0.3307
50848 ENSMUSG00000086078 Gm11657 predicted gene 11657 -1.7925 0.3307
50847 ENSMUSG00000084324 Gm6500 predicted gene 6500 -1.7925 0.1894
50846 ENSMUSG00000082435 Gm13813 predicted gene 13813 -1.7925 0.3307
50845 ENSMUSG00000082403 Gm14916 predicted gene 14916 -1.7925 0.1894

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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