SHOGoiN Cell Methylome: GSM1370545

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370545


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M23Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105218 Gm38413 predicted gene, 38413 3.1699 0.0000
2 ENSMUSG00000031355 Arhgap6 Rho GTPase activating protein 6 3.0000 0.0000
3 ENSMUSG00000069390 Olfr707 olfactory receptor 707 2.8074 0.0000
4 ENSMUSG00000081531 Vmn1r-ps113 vomeronasal 1 receptor, pseudogene 113 2.8074 0.0000
5 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 2.8074 0.0000
6 ENSMUSG00000110158 Gm45690 predicted gene 45690 2.8074 0.0000
7 ENSMUSG00000025758 Plk4 polo like kinase 4 2.5850 0.0003
8 ENSMUSG00000065068 n-R5s5 nuclear encoded rRNA 5S 5 2.5850 0.0003
9 ENSMUSG00000107681 4930528H21Rik RIKEN cDNA 4930528H21 gene 2.5850 0.0003
10 ENSMUSG00000091881 Gm17146 predicted gene 17146 2.5646 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000088703 Gm25555 predicted gene, 25555 -2.3764 0.0009
50853 ENSMUSG00000101334 1700028M03Rik RIKEN cDNA 1700028M03 gene -2.3685 0.0969
50852 ENSMUSG00000100680 1810044D09Rik RIKEN cDNA 1810044D09 gene -2.3502 0.0467
50851 ENSMUSG00000097693 4930471M09Rik RIKEN cDNA 4930471M09 gene -2.3502 0.0467
50850 ENSMUSG00000097520 4930488L21Rik RIKEN cDNA 4930488L21 gene -2.3502 0.1479
50849 ENSMUSG00000094603 Gm25872 predicted gene, 25872 -2.3481 0.4604
50848 ENSMUSG00000083563 Gm13340 predicted gene 13340 -2.3440 0.0000
50847 ENSMUSG00000103161 Gm38148 predicted gene, 38148 -2.3371 0.0011
50846 ENSMUSG00000083574 Gm15709 predicted gene 15709 -2.3282 0.0000
50845 ENSMUSG00000110120 Gm45251 predicted gene 45251 -2.3219 0.3671

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...