SHOGoiN Cell Methylome: GSM1370546

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370546


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M24Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 2.8122 0.0000
2 ENSMUSG00000109539 Gm44667 predicted gene 44667 2.8074 0.0008
3 ENSMUSG00000040132 Svs2 seminal vesicle secretory protein 2 2.3219 0.0089
4 ENSMUSG00000075137 Olfr1163 olfactory receptor 1163 2.3219 0.0089
5 ENSMUSG00000077971 Gm26259 predicted gene, 26259 2.3219 0.0089
6 ENSMUSG00000083094 Gm4908 predicted gene 4908 2.3219 0.0089
7 ENSMUSG00000083166 Gm8648 predicted gene 8648 2.3219 0.0089
8 ENSMUSG00000084479 Gm26424 predicted gene, 26424 2.3219 0.0089
9 ENSMUSG00000085757 Tslrn1 testis specific long noncoding RNA 1 2.3219 0.0001
10 ENSMUSG00000087815 Gm22491 predicted gene, 22491 2.3219 0.0089

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000089043 Gm24359 predicted gene, 24359 -2.0000 0.3678
50853 ENSMUSG00000088907 Gm25437 predicted gene, 25437 -2.0000 0.5576
50852 ENSMUSG00000088161 Gm23537 predicted gene, 23537 -2.0000 0.5576
50851 ENSMUSG00000087896 Gm25282 predicted gene, 25282 -2.0000 0.5576
50850 ENSMUSG00000087781 Gm23168 predicted gene, 23168 -2.0000 0.5576
50849 ENSMUSG00000087462 Gm2200 predicted gene 2200 -2.0000 0.5576
50848 ENSMUSG00000087108 Gm16093 predicted gene 16093 -2.0000 0.5576
50847 ENSMUSG00000086931 Gm14532 predicted gene 14532 -2.0000 0.0318
50846 ENSMUSG00000085976 Gm13816 predicted gene 13816 -2.0000 0.1869
50845 ENSMUSG00000085514 Bcas3os2 breast carcinoma amplified sequence 3 opposite strand 2 -2.0000 0.1869

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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