Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370555

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370555


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M25Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 5.0000 0.0000
2 ENSMUSG00000112452 Gm48075 predicted gene, 48075 3.4594 0.0034
3 ENSMUSG00000103465 Gm37617 predicted gene, 37617 3.0000 0.0209
4 ENSMUSG00000109354 Olfr706 olfactory receptor 706 3.0000 0.0000
5 ENSMUSG00000083238 Hspe1-ps4 heat shock protein 1 (chaperonin 10), pseudogene 4 2.8555 0.0000
6 ENSMUSG00000036938 Try5 trypsin 5 2.8074 0.0387
7 ENSMUSG00000082886 Gm5386 predicted pseudogene 5386 2.8074 0.0387
8 ENSMUSG00000101242 Gm28319 predicted gene 28319 2.8074 0.0387
9 ENSMUSG00000105290 Gm43528 predicted gene 43528 2.6326 0.0000
10 ENSMUSG00000044454 Olfr867 olfactory receptor 867 2.5850 0.0724

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000051817 Sox12 SRY (sex determining region Y)-box 12 -0.7333 0.0000
47079 ENSMUSG00000074580 4931440P22Rik RIKEN cDNA 4931440P22 gene -0.7332 0.0000
47078 ENSMUSG00000100005 B130024G19Rik RIKEN cDNA B130024G19 gene -0.7331 0.0000
47077 ENSMUSG00000107353 4930430O22Rik RIKEN cDNA 4930430O22 gene -0.7330 0.0000
47076 ENSMUSG00000082171 Rpl27-ps2 ribosomal protein L27, pseudogene 2 -0.7329 0.0000
47075 ENSMUSG00000107882 Gm44278 predicted gene, 44278 -0.7324 0.0000
47074 ENSMUSG00000100779 Gm29292 predicted gene 29292 -0.7323 0.0000
47073 ENSMUSG00000060152 Pop5 processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae) -0.7323 0.0000
47072 ENSMUSG00000053153 Spag16 sperm associated antigen 16 -0.7322 0.0000
10 ENSMUSG00000044454 Olfr867 olfactory receptor 867 2.5850 0.0724

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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