Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370555

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1370555 Profile download	7020001000000000000000-715	Sequence Read Archive	SRP041257	SRP041257_M25	Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity	Methylome	Embryonic stem cell	Mouse	Early embryonic tissue	Bisulfite-Seq (WGBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000069390	Olfr707	olfactory receptor 707	5.0000	0.0000
2	ENSMUSG00000112452	Gm48075	predicted gene, 48075	3.4594	0.0034
3	ENSMUSG00000103465	Gm37617	predicted gene, 37617	3.0000	0.0209
4	ENSMUSG00000109354	Olfr706	olfactory receptor 706	3.0000	0.0000
5	ENSMUSG00000083238	Hspe1-ps4	heat shock protein 1 (chaperonin 10), pseudogene 4	2.8555	0.0000
6	ENSMUSG00000036938	Try5	trypsin 5	2.8074	0.0387
7	ENSMUSG00000082886	Gm5386	predicted pseudogene 5386	2.8074	0.0387
8	ENSMUSG00000101242	Gm28319	predicted gene 28319	2.8074	0.0387
9	ENSMUSG00000105290	Gm43528	predicted gene 43528	2.6326	0.0000
10	ENSMUSG00000044454	Olfr867	olfactory receptor 867	2.5850	0.0724

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000051817	Sox12	SRY (sex determining region Y)-box 12	-0.7333	0.0000
47079	ENSMUSG00000074580	4931440P22Rik	RIKEN cDNA 4931440P22 gene	-0.7332	0.0000
47078	ENSMUSG00000100005	B130024G19Rik	RIKEN cDNA B130024G19 gene	-0.7331	0.0000
47077	ENSMUSG00000107353	4930430O22Rik	RIKEN cDNA 4930430O22 gene	-0.7330	0.0000
47076	ENSMUSG00000082171	Rpl27-ps2	ribosomal protein L27, pseudogene 2	-0.7329	0.0000
47075	ENSMUSG00000107882	Gm44278	predicted gene, 44278	-0.7324	0.0000
47074	ENSMUSG00000100779	Gm29292	predicted gene 29292	-0.7323	0.0000
47073	ENSMUSG00000060152	Pop5	processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)	-0.7323	0.0000
47072	ENSMUSG00000053153	Spag16	sperm associated antigen 16	-0.7322	0.0000
10	ENSMUSG00000044454	Olfr867	olfactory receptor 867	2.5850	0.0724

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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