SHOGoiN Cell Methylome: GSM1370555

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370555


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M25Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 5.0000 0.0000
2 ENSMUSG00000112452 Gm48075 predicted gene, 48075 3.4594 0.0034
3 ENSMUSG00000103465 Gm37617 predicted gene, 37617 3.0000 0.0209
4 ENSMUSG00000109354 Olfr706 olfactory receptor 706 3.0000 0.0000
5 ENSMUSG00000083238 Hspe1-ps4 heat shock protein 1 (chaperonin 10), pseudogene 4 2.8555 0.0000
6 ENSMUSG00000036938 Try5 trypsin 5 2.8074 0.0387
7 ENSMUSG00000082886 Gm5386 predicted pseudogene 5386 2.8074 0.0387
8 ENSMUSG00000101242 Gm28319 predicted gene 28319 2.8074 0.0387
9 ENSMUSG00000105290 Gm43528 predicted gene 43528 2.6326 0.0000
10 ENSMUSG00000044454 Olfr867 olfactory receptor 867 2.5850 0.0724

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000046196 Ttc39d tetratricopeptide repeat domain 39D -1.7874 0.0000
50853 ENSMUSG00000022052 Ppp2r2a protein phosphatase 2, regulatory subunit B, alpha -1.7821 0.0000
50852 ENSMUSG00000103009 Gm4430 predicted gene 4430 -1.7760 0.0000
50851 ENSMUSG00000027108 Ola1 Obg-like ATPase 1 -1.7745 0.0000
50850 ENSMUSG00000105522 Gm15235 predicted gene 15235 -1.7722 0.0000
50849 ENSMUSG00000082226 Gm715 predicted gene 715 -1.7717 0.0000
50848 ENSMUSG00000098944 Mir8120 microRNA 8120 -1.7717 0.0000
50847 ENSMUSG00000086774 Gm11915 predicted gene 11915 -1.7673 0.0000
50846 ENSMUSG00000020698 Cct6b chaperonin containing Tcp1, subunit 6b (zeta) -1.7673 0.0000
50845 ENSMUSG00000039242 B3galnt2 UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2 -1.7628 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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