Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370558

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370558


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M28Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109539 Gm44667 predicted gene 44667 3.4594 0.0002
2 ENSMUSG00000020620 Abca8b ATP-binding cassette, sub-family A (ABC1), member 8b 2.6455 0.0000
3 ENSMUSG00000069390 Olfr707 olfactory receptor 707 2.6240 0.0000
4 ENSMUSG00000109354 Olfr706 olfactory receptor 706 2.6240 0.0000
5 ENSMUSG00000017688 Hnf4g hepatocyte nuclear factor 4, gamma 2.5850 0.0002
6 ENSMUSG00000082971 Gm13517 predicted gene 13517 2.5850 0.0152
7 ENSMUSG00000098114 Gm26957 predicted gene, 26957 2.5850 0.0152
8 ENSMUSG00000107957 Gm44088 predicted gene, 44088 2.5000 0.0002
9 ENSMUSG00000027209 Fam227b family with sequence similarity 227, member B 2.3219 0.0000
10 ENSMUSG00000029281 Smr2 submaxillary gland androgen regulated protein 2 2.3219 0.0352

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47080 ENSMUSG00000061119 Prcp prolylcarboxypeptidase (angiotensinase C) -0.9091 0.0000
47079 ENSMUSG00000051062 Fbll1 fibrillarin-like 1 -0.9091 0.0001
47078 ENSMUSG00000036339 Tmem260 transmembrane protein 260 -0.9091 0.0001
47077 ENSMUSG00000018415 Gid4 GID complex subunit 4, VID24 homolog -0.9091 0.0001
47076 ENSMUSG00000032643 Fhl3 four and a half LIM domains 3 -0.9091 0.0000
47075 ENSMUSG00000035198 Tubg1 tubulin, gamma 1 -0.9088 0.0000
47074 ENSMUSG00000037166 Ppp1r14a protein phosphatase 1, regulatory inhibitor subunit 14A -0.9088 0.0000
47073 ENSMUSG00000007029 Vars valyl-tRNA synthetase -0.9088 0.0000
47072 ENSMUSG00000061665 Cd2ap CD2-associated protein -0.9085 0.0003
10 ENSMUSG00000029281 Smr2 submaxillary gland androgen regulated protein 2 2.3219 0.0352

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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