Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370559

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370559


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M29Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000053678 Defb40 defensin beta 40 4.9069 0.0000
2 ENSMUSG00000101242 Gm28319 predicted gene 28319 3.3219 0.0006
3 ENSMUSG00000049882 Vcpkmt valosin containing protein lysine (K) methyltransferase 3.0000 0.0030
4 ENSMUSG00000065919 Gm24449 predicted gene, 24449 3.0000 0.0030
5 ENSMUSG00000050813 Olfr332 olfactory receptor 332 2.8074 0.0069
7 ENSMUSG00000104318 Pcdha7 protocadherin alpha 7 2.8074 0.0069
8 ENSMUSG00000067971 Olfr1321 olfactory receptor 1321 2.6455 0.0000
9 ENSMUSG00000084248 Gm11409 predicted gene 11409 2.4534 0.0006
10 ENSMUSG00000021975 Ints9 integrator complex subunit 9 2.3219 0.0013
47072 ENSMUSG00000057396 Zfp759 zinc finger protein 759 -1.0000 0.2620

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47080 ENSMUSG00000058470 Gm8369 predicted gene 8369 -1.0000 0.5080
47079 ENSMUSG00000058385 H2bc8 H2B clustered histone 8 -1.0000 0.5080
47078 ENSMUSG00000058275 Olfr412 olfactory receptor 412 -1.0000 1.0000
47077 ENSMUSG00000058200 Olfr66 olfactory receptor 66 -1.0000 1.0000
47076 ENSMUSG00000058093 Zfp729b zinc finger protein 729b -1.0000 1.0000
47075 ENSMUSG00000057650 Krtap19-2 keratin associated protein 19-2 -1.0000 0.5080
47074 ENSMUSG00000057503 Olfr1459 olfactory receptor 1459 -1.0000 1.0000
47073 ENSMUSG00000057443 Olfr138 olfactory receptor 138 -1.0000 1.0000
47072 ENSMUSG00000057396 Zfp759 zinc finger protein 759 -1.0000 0.2620
10 ENSMUSG00000021975 Ints9 integrator complex subunit 9 2.3219 0.0013

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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