SHOGoiN Cell Methylome: GSM1370562

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370562


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M32Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 4.9069 0.0000
2 ENSMUSG00000040370 Etfrf1 electron transfer flavoprotein regulatory factor 1 4.3923 0.0000
3 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 3.5850 0.0011
4 ENSMUSG00000102267 9530003O04Rik RIKEN cDNA 9530003O04 gene 3.3219 0.0042
5 ENSMUSG00000110940 Olfr274-ps1 olfactory receptor 274, pseudogene 1 3.0000 0.0162
6 ENSMUSG00000105290 Gm43528 predicted gene 43528 2.6962 0.0000
7 ENSMUSG00000043384 Gprasp1 G protein-coupled receptor associated sorting protein 1 2.6427 0.0001
8 ENSMUSG00000072964 Bhlhb9 basic helix-loop-helix domain containing, class B9 2.6427 0.0001
9 ENSMUSG00000036036 Zfp57 zinc finger protein 57 2.5850 0.0636
10 ENSMUSG00000104509 Gm33994 predicted gene, 33994 2.5850 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000021466 Ptch1 patched 1 -1.5817 0.0000
50853 ENSMUSG00000089371 Mir1938 microRNA 1938 -1.5798 0.0000
50852 ENSMUSG00000024712 Rfk riboflavin kinase -1.5733 0.0000
50851 ENSMUSG00000108466 Gm44771 predicted gene 44771 -1.5681 0.0000
50850 ENSMUSG00000029169 Dhx15 DEAH (Asp-Glu-Ala-His) box polypeptide 15 -1.5662 0.0000
50849 ENSMUSG00000073563 Csnk1g3 casein kinase 1, gamma 3 -1.5646 0.0000
50848 ENSMUSG00000108348 Gm42372 predicted gene, 42372 -1.5620 0.0000
50847 ENSMUSG00000001380 Hars histidyl-tRNA synthetase -1.5611 0.0000
50846 ENSMUSG00000034575 Tent4a terminal nucleotidyltransferase 4A -1.5608 0.0000
50845 ENSMUSG00000102758 Naaladl2 N-acetylated alpha-linked acidic dipeptidase-like 2 -1.5550 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...