SHOGoiN Cell Methylome: GSM1370565

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370565


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M35Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105290 Gm43528 predicted gene 43528 4.8580 0.0000
2 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 3.8074 0.0002
3 ENSMUSG00000098114 Gm26957 predicted gene, 26957 3.5850 0.0010
4 ENSMUSG00000015405 Ace2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 3.0000 0.0156
5 ENSMUSG00000103125 Gm37388 predicted gene, 37388 3.0000 0.0156
6 ENSMUSG00000104318 Pcdha7 protocadherin alpha 7 3.0000 0.0156
7 ENSMUSG00000040254 Sema3d sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D 2.8074 0.0005
8 ENSMUSG00000040370 Etfrf1 electron transfer flavoprotein regulatory factor 1 2.7618 0.0000
9 ENSMUSG00000078932 CN725425 cDNA sequence CN725425 2.6610 0.0001
10 ENSMUSG00000109354 Olfr706 olfactory receptor 706 2.6591 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000098463 Cphx2 cytoplasmic polyadenylated homeobox 2 -1.5850 0.2495
50853 ENSMUSG00000097679 Rps19-ps5 ribosomal protein S19, pseudogene 5 -1.5850 0.2495
50852 ENSMUSG00000097110 Gm26726 predicted gene, 26726 -1.5850 0.0010
50850 ENSMUSG00000095878 Gm23045 predicted gene, 23045 -1.5850 0.0155
50849 ENSMUSG00000095847 Gm5451 predicted gene 5451 -1.5850 0.0000
50848 ENSMUSG00000094939 Gm21773 predicted gene, 21773 -1.5850 0.2495
50847 ENSMUSG00000094817 Cphx3 cytoplasmic polyadenylated homeobox 3 -1.5850 0.2495
50846 ENSMUSG00000094357 Gm25570 predicted gene, 25570 -1.5850 0.2495
50845 ENSMUSG00000093509 Obox3-ps3 oocyte specific homeobox 3, pseudogene 3 -1.5850 0.2495
10 ENSMUSG00000109354 Olfr706 olfactory receptor 706 2.6591 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...