SHOGoiN Cell Methylome: GSM1370566
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1370566 Profile download | 7020001000000000000000-715 | Sequence Read Archive | SRP041257 | SRP041257_M36 | Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity | Methylome | Embryonic stem cell | Mouse | Early embryonic tissue | Bisulfite-Seq (WGBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000069390 | Olfr707 | NA | 4.8074 | 0.0000 |
| 2 | ENSMUSG00000109354 | Olfr706 | NA | 4.8074 | 0.0000 |
| 3 | ENSMUSG00000109539 | Gm44667 | predicted gene 44667 | 4.6439 | 0.0000 |
| 4 | ENSMUSG00000112452 | Gm48075 | predicted gene, 48075 | 4.6439 | 0.0000 |
| 5 | ENSMUSG00000020191 | Spata48 | Spermatosis-associated protein 48 | 4.3923 | 0.0000 |
| 6 | ENSMUSG00000072964 | Bhlhb9 | Protein BHLHb9 | 4.1699 | 0.0000 |
| 7 | ENSMUSG00000015405 | Ace2 | angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 | 3.3219 | 0.0019 |
| 8 | ENSMUSG00000098299 | Mir7224 | microRNA 7224 | 3.3219 | 0.0019 |
| 9 | ENSMUSG00000102569 | Gm37041 | predicted gene, 37041 | 3.1699 | 0.0000 |
| 10 | ENSMUSG00000055782 | Abcd2 | ATP-binding cassette, sub-family D (ALD), member 2 | 3.1427 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50998 | ENSMUSG00000080886 | Gm14847 | predicted gene 14847 | -2.4594 | 0.0117 |
| 50997 | ENSMUSG00000073878 | Gm13304 | predicted gene 13304 | -2.4594 | 0.0117 |
| 50996 | ENSMUSG00000082935 | Gm7658 | predicted gene 7658 | -2.4534 | 0.0001 |
| 50995 | ENSMUSG00000081803 | Gm15282 | predicted gene 15282 | -2.4037 | 0.0039 |
| 50994 | ENSMUSG00000100884 | Gm28281 | predicted gene 28281 | -2.3907 | 0.0010 |
| 50993 | ENSMUSG00000100515 | Gm17916 | predicted gene, 17916 | -2.3774 | 0.0020 |
| 50992 | ENSMUSG00000105610 | Gm47313 | predicted gene, 47313 | -2.3343 | 0.0000 |
| 50991 | ENSMUSG00000093769 | Hist2h3c1 | Histone H3.2 | -2.3343 | 0.0000 |
| 50990 | ENSMUSG00000093553 | Gm20633 | predicted gene 20633 | -2.3343 | 0.0000 |
| 50989 | ENSMUSG00000070392 | Gm20634 | predicted gene 20634 | -2.3343 | 0.0000 |
