SHOGoiN Cell Methylome: GSM1370566
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1370566 Profile download | 7020001000000000000000-715 | Sequence Read Archive | SRP041257 | SRP041257_M36 | Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity | Methylome | Embryonic stem cell | Mouse | Early embryonic tissue | Bisulfite-Seq (WGBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000069390 | Olfr707 | olfactory receptor 707 | 4.8074 | 0.0000 |
| 2 | ENSMUSG00000109354 | Olfr706 | olfactory receptor 706 | 4.8074 | 0.0000 |
| 3 | ENSMUSG00000109539 | Gm44667 | predicted gene 44667 | 4.6439 | 0.0000 |
| 4 | ENSMUSG00000112452 | Gm48075 | predicted gene, 48075 | 4.6439 | 0.0000 |
| 5 | ENSMUSG00000020191 | Spata48 | spermatogenesis associated 48 | 4.3923 | 0.0000 |
| 6 | ENSMUSG00000072964 | Bhlhb9 | basic helix-loop-helix domain containing, class B9 | 4.1699 | 0.0000 |
| 7 | ENSMUSG00000015405 | Ace2 | angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 | 3.3219 | 0.0019 |
| 8 | ENSMUSG00000098299 | Mir7224 | microRNA 7224 | 3.3219 | 0.0019 |
| 9 | ENSMUSG00000102569 | Gm37041 | predicted gene, 37041 | 3.1699 | 0.0000 |
| 10 | ENSMUSG00000055782 | Abcd2 | ATP-binding cassette, sub-family D (ALD), member 2 | 3.1427 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000107645 | Olfr1380 | olfactory receptor 1380 | -1.6240 | 0.0005 |
| 50853 | ENSMUSG00000094127 | G530012D18Rik | RIKEN cDNA G530012D1 gene | -1.6240 | 0.0001 |
| 50852 | ENSMUSG00000088374 | Gm22882 | predicted gene, 22882 | -1.6240 | 0.0001 |
| 50851 | ENSMUSG00000037965 | Zc3h7a | zinc finger CCCH type containing 7 A | -1.6217 | 0.0000 |
| 50850 | ENSMUSG00000097533 | Gm26590 | predicted gene, 26590 | -1.6115 | 0.0000 |
| 50849 | ENSMUSG00000031481 | Tpte | transmembrane phosphatase with tensin homology | -1.6110 | 0.0000 |
| 50848 | ENSMUSG00000037415 | Ranbp10 | RAN binding protein 10 | -1.5997 | 0.0000 |
| 50847 | ENSMUSG00000063954 | Hist2h2aa2 | histone cluster 2, H2aa2 | -1.5933 | 0.0000 |
| 50846 | ENSMUSG00000028199 | Cryz | crystallin, zeta | -1.5895 | 0.0000 |
| 50845 | ENSMUSG00000028394 | Pole3 | polymerase (DNA directed), epsilon 3 (p17 subunit) | -1.5874 | 0.0000 |
