Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370566

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370566


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M36Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 4.8074 0.0000
2 ENSMUSG00000109354 Olfr706 olfactory receptor 706 4.8074 0.0000
3 ENSMUSG00000109539 Gm44667 predicted gene 44667 4.6439 0.0000
4 ENSMUSG00000112452 Gm48075 predicted gene, 48075 4.6439 0.0000
5 ENSMUSG00000020191 Spata48 spermatogenesis associated 48 4.3923 0.0000
6 ENSMUSG00000072964 Bhlhb9 basic helix-loop-helix domain containing, class B9 4.1699 0.0000
7 ENSMUSG00000015405 Ace2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 3.3219 0.0019
8 ENSMUSG00000098299 Mir7224 microRNA 7224 3.3219 0.0019
9 ENSMUSG00000102569 Gm37041 predicted gene, 37041 3.1699 0.0000
10 ENSMUSG00000055782 Abcd2 ATP-binding cassette, sub-family D (ALD), member 2 3.1427 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000026208 Des desmin -0.8113 0.0000
47080 ENSMUSG00000038037 Socs1 suppressor of cytokine signaling 1 -0.8113 0.0000
47079 ENSMUSG00000026942 Traf2 TNF receptor-associated factor 2 -0.8108 0.0000
47078 ENSMUSG00000023067 Cdkn1a cyclin-dependent kinase inhibitor 1A (P21) -0.8101 0.0000
47077 ENSMUSG00000001666 Ddt D-dopachrome tautomerase -0.8099 0.0000
47076 ENSMUSG00000105810 Gm43435 predicted gene 43435 -0.8095 0.0002
47075 ENSMUSG00000088185 Scarna2 small Cajal body-specific RNA 2 -0.8095 0.0002
47074 ENSMUSG00000070858 Gm1673 predicted gene 1673 -0.8095 0.0002
47073 ENSMUSG00000025969 Nrp2 neuropilin 2 -0.8095 0.0005
47072 ENSMUSG00000025377 Tepsin TEPSIN, adaptor related protein complex 4 accessory protein -0.8095 0.0002

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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