SHOGoiN Cell Methylome: GSM1370566

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370566


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M36Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 4.8074 0.0000
2 ENSMUSG00000109354 Olfr706 olfactory receptor 706 4.8074 0.0000
3 ENSMUSG00000109539 Gm44667 predicted gene 44667 4.6439 0.0000
4 ENSMUSG00000112452 Gm48075 predicted gene, 48075 4.6439 0.0000
5 ENSMUSG00000020191 Spata48 spermatogenesis associated 48 4.3923 0.0000
6 ENSMUSG00000072964 Bhlhb9 basic helix-loop-helix domain containing, class B9 4.1699 0.0000
7 ENSMUSG00000015405 Ace2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 3.3219 0.0019
8 ENSMUSG00000098299 Mir7224 microRNA 7224 3.3219 0.0019
9 ENSMUSG00000102569 Gm37041 predicted gene, 37041 3.1699 0.0000
10 ENSMUSG00000055782 Abcd2 ATP-binding cassette, sub-family D (ALD), member 2 3.1427 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000107645 Olfr1380 olfactory receptor 1380 -1.6240 0.0005
50853 ENSMUSG00000094127 G530012D18Rik RIKEN cDNA G530012D1 gene -1.6240 0.0001
50852 ENSMUSG00000088374 Gm22882 predicted gene, 22882 -1.6240 0.0001
50851 ENSMUSG00000037965 Zc3h7a zinc finger CCCH type containing 7 A -1.6217 0.0000
50850 ENSMUSG00000097533 Gm26590 predicted gene, 26590 -1.6115 0.0000
50849 ENSMUSG00000031481 Tpte transmembrane phosphatase with tensin homology -1.6110 0.0000
50848 ENSMUSG00000037415 Ranbp10 RAN binding protein 10 -1.5997 0.0000
50847 ENSMUSG00000063954 Hist2h2aa2 histone cluster 2, H2aa2 -1.5933 0.0000
50846 ENSMUSG00000028199 Cryz crystallin, zeta -1.5895 0.0000
50845 ENSMUSG00000028394 Pole3 polymerase (DNA directed), epsilon 3 (p17 subunit) -1.5874 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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