Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370566

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1370566 Profile download	7020001000000000000000-715	Sequence Read Archive	SRP041257	SRP041257_M36	Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity	Methylome	Embryonic stem cell	Mouse	Early embryonic tissue	Bisulfite-Seq (WGBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000069390	Olfr707	olfactory receptor 707	4.8074	0.0000
2	ENSMUSG00000109354	Olfr706	olfactory receptor 706	4.8074	0.0000
3	ENSMUSG00000109539	Gm44667	predicted gene 44667	4.6439	0.0000
4	ENSMUSG00000112452	Gm48075	predicted gene, 48075	4.6439	0.0000
5	ENSMUSG00000020191	Spata48	spermatogenesis associated 48	4.3923	0.0000
6	ENSMUSG00000072964	Bhlhb9	basic helix-loop-helix domain containing, class B9	4.1699	0.0000
7	ENSMUSG00000015405	Ace2	angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	3.3219	0.0019
8	ENSMUSG00000098299	Mir7224	microRNA 7224	3.3219	0.0019
9	ENSMUSG00000102569	Gm37041	predicted gene, 37041	3.1699	0.0000
10	ENSMUSG00000055782	Abcd2	ATP-binding cassette, sub-family D (ALD), member 2	3.1427	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000026208	Des	desmin	-0.8113	0.0000
47080	ENSMUSG00000038037	Socs1	suppressor of cytokine signaling 1	-0.8113	0.0000
47079	ENSMUSG00000026942	Traf2	TNF receptor-associated factor 2	-0.8108	0.0000
47078	ENSMUSG00000023067	Cdkn1a	cyclin-dependent kinase inhibitor 1A (P21)	-0.8101	0.0000
47077	ENSMUSG00000001666	Ddt	D-dopachrome tautomerase	-0.8099	0.0000
47076	ENSMUSG00000105810	Gm43435	predicted gene 43435	-0.8095	0.0002
47075	ENSMUSG00000088185	Scarna2	small Cajal body-specific RNA 2	-0.8095	0.0002
47074	ENSMUSG00000070858	Gm1673	predicted gene 1673	-0.8095	0.0002
47073	ENSMUSG00000025969	Nrp2	neuropilin 2	-0.8095	0.0005
47072	ENSMUSG00000025377	Tepsin	TEPSIN, adaptor related protein complex 4 accessory protein	-0.8095	0.0002

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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