SHOGoiN Cell Methylome: GSM1370568

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370568


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M38Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109354 Olfr706 olfactory receptor 706 5.2479 0.0000
2 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 3.0000 0.0048
3 ENSMUSG00000111982 Gm35135 predicted gene, 35135 2.5850 0.0005
4 ENSMUSG00000084441 Gm26255 predicted gene, 26255 2.3219 0.0473
5 ENSMUSG00000095331 Ptma-ps1 prothymosin alpha, pseudogene 1 2.3219 0.0473
6 ENSMUSG00000104152 Ighv10-4 immunoglobulin heavy variable V10-4 2.3219 0.0473
7 ENSMUSG00000110999 Olfr1075-ps1 olfactory receptor 1075, pseudogene 1 2.3219 0.0022
8 ENSMUSG00000105290 Gm43528 predicted gene 43528 2.1699 0.0153
9 ENSMUSG00000069390 Olfr707 olfactory receptor 707 2.0620 0.0000
10 ENSMUSG00000091028 Gm10722 predicted gene 10722 2.0026 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000107277 Gm10461 predicted gene 10461 -1.3304 0.0000
50853 ENSMUSG00000098120 Gm5914 predicted gene 5914 -1.3303 0.0000
50852 ENSMUSG00000085776 5430402O13Rik RIKEN cDNA 5430402O13 gene -1.3277 0.0000
50851 ENSMUSG00000075324 Fign fidgetin -1.3265 0.0001
50850 ENSMUSG00000080681 Gm23990 predicted gene, 23990 -1.3256 0.0000
50849 ENSMUSG00000024165 Jpt2 Jupiter microtubule associated homolog 2 -1.3244 0.0000
50848 ENSMUSG00000072769 Gm10419 predicted gene 10419 -1.3243 0.0000
50847 ENSMUSG00000027427 Polr3f polymerase (RNA) III (DNA directed) polypeptide F -1.3242 0.0000
50846 ENSMUSG00000030525 Chrna7 cholinergic receptor, nicotinic, alpha polypeptide 7 -1.3231 0.0000
50845 ENSMUSG00000101531 Gm29672 predicted gene 29672 -1.3219 0.3807

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...