Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370569

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1370569 Profile download	7020001000000000000000-715	Sequence Read Archive	SRP041257	SRP041257_M39	Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity	Methylome	Embryonic stem cell	Mouse	Early embryonic tissue	Bisulfite-Seq (WGBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000069390	Olfr707	olfactory receptor 707	6.2668	0.0000
2	ENSMUSG00000101242	Gm28319	predicted gene 28319	4.5850	0.0000
3	ENSMUSG00000105290	Gm43528	predicted gene 43528	4.3219	0.0000
4	ENSMUSG00000084441	Gm26255	predicted gene, 26255	3.7004	0.0000
5	ENSMUSG00000101818	Gm28269	predicted gene 28269	3.5850	0.0001
6	ENSMUSG00000104152	Ighv10-4	immunoglobulin heavy variable V10-4	3.3219	0.0005
7	ENSMUSG00000108303	Gm39075	predicted gene, 39075	3.1699	0.0013
8	ENSMUSG00000112613	Gm48175	predicted gene, 48175	3.1699	0.0013
9	ENSMUSG00000093385	A330044P14Rik	RIKEN cDNA A330044P14 gene	3.0000	0.0029
10	ENSMUSG00000108262	Gm43867	predicted gene, 43867	3.0000	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000039231	Suv39h1	suppressor of variegation 3-9 1	-1.0000	0.0735
47080	ENSMUSG00000039016	Timm8b	translocase of inner mitochondrial membrane 8B	-1.0000	1.0000
47079	ENSMUSG00000038827	Abitram	actin binding transcription modulator	-1.0000	0.0000
47078	ENSMUSG00000038760	Trhr	thyrotropin releasing hormone receptor	-1.0000	0.2631
47077	ENSMUSG00000038736	Nudcd1	NudC domain containing 1	-1.0000	0.0018
47076	ENSMUSG00000038612	Mcl1	myeloid cell leukemia sequence 1	-1.0000	0.0215
47075	ENSMUSG00000038602	Slc35f1	solute carrier family 35, member F1	-1.0000	1.0000
47074	ENSMUSG00000038525	Armc10	armadillo repeat containing 10	-1.0000	0.0035
47073	ENSMUSG00000038462	Uqcrfs1	ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	-1.0000	0.0118
47072	ENSMUSG00000038451	Spsb2	splA/ryanodine receptor domain and SOCS box containing 2	-1.0000	0.0010

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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