SHOGoiN Cell Methylome: GSM1370569

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370569


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M39Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 6.2668 0.0000
2 ENSMUSG00000101242 Gm28319 predicted gene 28319 4.5850 0.0000
3 ENSMUSG00000105290 Gm43528 predicted gene 43528 4.3219 0.0000
4 ENSMUSG00000084441 Gm26255 predicted gene, 26255 3.7004 0.0000
5 ENSMUSG00000101818 Gm28269 predicted gene 28269 3.5850 0.0001
6 ENSMUSG00000104152 Ighv10-4 immunoglobulin heavy variable V10-4 3.3219 0.0005
7 ENSMUSG00000108303 Gm39075 predicted gene, 39075 3.1699 0.0013
8 ENSMUSG00000112613 Gm48175 predicted gene, 48175 3.1699 0.0013
9 ENSMUSG00000093385 A330044P14Rik RIKEN cDNA A330044P14 gene 3.0000 0.0029
10 ENSMUSG00000108262 Gm43867 predicted gene, 43867 3.0000 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000104910 Gm43331 predicted gene 43331 -1.5850 0.5087
50853 ENSMUSG00000104425 Gm38370 predicted gene, 38370 -1.5850 0.5087
50852 ENSMUSG00000103747 Gm38236 predicted gene, 38236 -1.5850 0.5087
50851 ENSMUSG00000103492 Gm37412 predicted gene, 37412 -1.5850 0.5087
50850 ENSMUSG00000103368 Gm36927 predicted gene, 36927 -1.5850 0.5087
50849 ENSMUSG00000103191 Gm37646 predicted gene, 37646 -1.5850 0.1381
50848 ENSMUSG00000103190 Gm34716 predicted gene, 34716 -1.5850 0.5087
50847 ENSMUSG00000103163 Gm38146 predicted gene, 38146 -1.5850 0.0118
50846 ENSMUSG00000102939 Gm38111 predicted gene, 38111 -1.5850 0.5087
50845 ENSMUSG00000102775 Gm38160 predicted gene, 38160 -1.5850 0.5087

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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