SHOGoiN Cell Methylome: GSM1370569
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1370569 Profile download | 7020001000000000000000-715 | Sequence Read Archive | SRP041257 | SRP041257_M39 | Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity | Methylome | Embryonic stem cell | Mouse | Early embryonic tissue | Bisulfite-Seq (WGBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000069390 | Olfr707 | olfactory receptor 707 | 6.2668 | 0.0000 |
| 2 | ENSMUSG00000101242 | Gm28319 | predicted gene 28319 | 4.5850 | 0.0000 |
| 3 | ENSMUSG00000105290 | Gm43528 | predicted gene 43528 | 4.3219 | 0.0000 |
| 4 | ENSMUSG00000084441 | Gm26255 | predicted gene, 26255 | 3.7004 | 0.0000 |
| 5 | ENSMUSG00000101818 | Gm28269 | predicted gene 28269 | 3.5850 | 0.0001 |
| 6 | ENSMUSG00000104152 | Ighv10-4 | immunoglobulin heavy variable V10-4 | 3.3219 | 0.0005 |
| 7 | ENSMUSG00000108303 | Gm39075 | predicted gene, 39075 | 3.1699 | 0.0013 |
| 8 | ENSMUSG00000112613 | Gm48175 | predicted gene, 48175 | 3.1699 | 0.0013 |
| 9 | ENSMUSG00000093385 | A330044P14Rik | RIKEN cDNA A330044P14 gene | 3.0000 | 0.0029 |
| 10 | ENSMUSG00000108262 | Gm43867 | predicted gene, 43867 | 3.0000 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000104910 | Gm43331 | predicted gene 43331 | -1.5850 | 0.5087 |
| 50853 | ENSMUSG00000104425 | Gm38370 | predicted gene, 38370 | -1.5850 | 0.5087 |
| 50852 | ENSMUSG00000103747 | Gm38236 | predicted gene, 38236 | -1.5850 | 0.5087 |
| 50851 | ENSMUSG00000103492 | Gm37412 | predicted gene, 37412 | -1.5850 | 0.5087 |
| 50850 | ENSMUSG00000103368 | Gm36927 | predicted gene, 36927 | -1.5850 | 0.5087 |
| 50849 | ENSMUSG00000103191 | Gm37646 | predicted gene, 37646 | -1.5850 | 0.1381 |
| 50848 | ENSMUSG00000103190 | Gm34716 | predicted gene, 34716 | -1.5850 | 0.5087 |
| 50847 | ENSMUSG00000103163 | Gm38146 | predicted gene, 38146 | -1.5850 | 0.0118 |
| 50846 | ENSMUSG00000102939 | Gm38111 | predicted gene, 38111 | -1.5850 | 0.5087 |
| 50845 | ENSMUSG00000102775 | Gm38160 | predicted gene, 38160 | -1.5850 | 0.5087 |
