SHOGoiN Cell Methylome: GSM1370570

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370570


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M40Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000102569 Gm37041 predicted gene, 37041 4.7549 0.0000
2 ENSMUSG00000105290 Gm43528 predicted gene 43528 4.4594 0.0000
3 ENSMUSG00000095737 Igkv11-125 immunoglobulin kappa variable 11-125 3.1699 0.0006
4 ENSMUSG00000102134 Gm9931 predicted gene 9931 3.1699 0.0006
5 ENSMUSG00000031712 Il15 interleukin 15 3.0000 0.0016
6 ENSMUSG00000082540 Vmn1r-ps112 vomeronasal 1 receptor, pseudogene 112 2.9290 0.0000
7 ENSMUSG00000069014 Gm5641 predicted gene 5641 2.8074 0.0039
8 ENSMUSG00000088362 Gm23498 predicted gene, 23498 2.8074 0.0039
9 ENSMUSG00000084441 Gm26255 predicted gene, 26255 2.6240 0.0000
10 ENSMUSG00000081731 Calr-ps calreticulin, pseudogene 2.5850 0.0099

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000093919 Gm20760 predicted gene, 20760 -1.5525 0.0000
50853 ENSMUSG00000108391 Gm9768 predicted gene 9768 -1.5514 0.0000
50852 ENSMUSG00000037266 Rsrp1 arginine/serine rich protein 1 -1.5509 0.0000
50851 ENSMUSG00000022533 Atp13a3 ATPase type 13A3 -1.5494 0.0000
50850 ENSMUSG00000022299 Slc25a32 solute carrier family 25, member 32 -1.5483 0.0000
50849 ENSMUSG00000084950 Gm5577 predicted gene 5577 -1.5478 0.0000
50848 ENSMUSG00000022300 Dcaf13 DDB1 and CUL4 associated factor 13 -1.5476 0.0000
50847 ENSMUSG00000106591 Gm47286 predicted gene, 47286 -1.5451 0.0000
50846 ENSMUSG00000103051 Gm7871 predicted gene 7871 -1.5425 0.0141
50845 ENSMUSG00000047694 Yipf6 Yip1 domain family, member 6 -1.5414 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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