Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370572

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370572


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M42Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 5.9887 0.0000
2 ENSMUSG00000109539 Gm44667 predicted gene 44667 5.7549 0.0000
3 ENSMUSG00000047419 Cmya5 cardiomyopathy associated 5 4.5850 0.0000
4 ENSMUSG00000102569 Gm37041 predicted gene, 37041 4.0875 0.0000
5 ENSMUSG00000109354 Olfr706 olfactory receptor 706 3.7868 0.0000
6 ENSMUSG00000075137 Olfr1163 olfactory receptor 1163 3.5850 0.0003
7 ENSMUSG00000089678 Agxt2 alanine-glyoxylate aminotransferase 2 3.5850 0.0003
8 ENSMUSG00000103465 Gm37617 predicted gene, 37617 3.3219 0.0014
9 ENSMUSG00000110158 Gm45690 predicted gene 45690 3.3219 0.0014
10 ENSMUSG00000082886 Gm5386 predicted pseudogene 5386 3.1699 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000030877 Mfsd13b major facilitator superfamily domain containing 13B -0.8097 0.0000
47079 ENSMUSG00000097564 C430014B12Rik RIKEN cDNA C430014B12 gene -0.8095 0.0000
47078 ENSMUSG00000091378 Gm4219 predicted gene 4219 -0.8095 0.0003
47077 ENSMUSG00000086725 A630052C17Rik RIKEN cDNA A630052C17 gene -0.8095 0.0003
47076 ENSMUSG00000078915 Hsp25-ps1 heat shock protein 25, pseudogene 1 -0.8095 0.0003
47075 ENSMUSG00000063406 Tmed5 transmembrane p24 trafficking protein 5 -0.8095 0.0003
47074 ENSMUSG00000054000 Tusc1 tumor suppressor candidate 1 -0.8095 0.0003
47073 ENSMUSG00000042541 Sem1 SEM1, 26S proteasome complex subunit -0.8095 0.0003
47072 ENSMUSG00000040022 Rab11fip2 RAB11 family interacting protein 2 (class I) -0.8095 0.0003
10 ENSMUSG00000082886 Gm5386 predicted pseudogene 5386 3.1699 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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