Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370572

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1370572 Profile download	7020001000000000000000-715	Sequence Read Archive	SRP041257	SRP041257_M42	Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity	Methylome	Embryonic stem cell	Mouse	Early embryonic tissue	Bisulfite-Seq (WGBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000069390	Olfr707	olfactory receptor 707	5.9887	0.0000
2	ENSMUSG00000109539	Gm44667	predicted gene 44667	5.7549	0.0000
3	ENSMUSG00000047419	Cmya5	cardiomyopathy associated 5	4.5850	0.0000
4	ENSMUSG00000102569	Gm37041	predicted gene, 37041	4.0875	0.0000
5	ENSMUSG00000109354	Olfr706	olfactory receptor 706	3.7868	0.0000
6	ENSMUSG00000075137	Olfr1163	olfactory receptor 1163	3.5850	0.0003
7	ENSMUSG00000089678	Agxt2	alanine-glyoxylate aminotransferase 2	3.5850	0.0003
8	ENSMUSG00000103465	Gm37617	predicted gene, 37617	3.3219	0.0014
9	ENSMUSG00000110158	Gm45690	predicted gene 45690	3.3219	0.0014
10	ENSMUSG00000082886	Gm5386	predicted pseudogene 5386	3.1699	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000030877	Mfsd13b	major facilitator superfamily domain containing 13B	-0.8097	0.0000
47079	ENSMUSG00000097564	C430014B12Rik	RIKEN cDNA C430014B12 gene	-0.8095	0.0000
47078	ENSMUSG00000091378	Gm4219	predicted gene 4219	-0.8095	0.0003
47077	ENSMUSG00000086725	A630052C17Rik	RIKEN cDNA A630052C17 gene	-0.8095	0.0003
47076	ENSMUSG00000078915	Hsp25-ps1	heat shock protein 25, pseudogene 1	-0.8095	0.0003
47075	ENSMUSG00000063406	Tmed5	transmembrane p24 trafficking protein 5	-0.8095	0.0003
47074	ENSMUSG00000054000	Tusc1	tumor suppressor candidate 1	-0.8095	0.0003
47073	ENSMUSG00000042541	Sem1	SEM1, 26S proteasome complex subunit	-0.8095	0.0003
47072	ENSMUSG00000040022	Rab11fip2	RAB11 family interacting protein 2 (class I)	-0.8095	0.0003
10	ENSMUSG00000082886	Gm5386	predicted pseudogene 5386	3.1699	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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