SHOGoiN Cell Methylome: GSM1370572

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1370572


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7020001000000000000000-715Sequence Read ArchiveSRP041257SRP041257_M42Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000069390 Olfr707 olfactory receptor 707 5.9887 0.0000
2 ENSMUSG00000109539 Gm44667 predicted gene 44667 5.7549 0.0000
3 ENSMUSG00000047419 Cmya5 cardiomyopathy associated 5 4.5850 0.0000
4 ENSMUSG00000102569 Gm37041 predicted gene, 37041 4.0875 0.0000
5 ENSMUSG00000109354 Olfr706 olfactory receptor 706 3.7868 0.0000
6 ENSMUSG00000075137 Olfr1163 olfactory receptor 1163 3.5850 0.0003
7 ENSMUSG00000089678 Agxt2 alanine-glyoxylate aminotransferase 2 3.5850 0.0003
8 ENSMUSG00000103465 Gm37617 predicted gene, 37617 3.3219 0.0014
9 ENSMUSG00000110158 Gm45690 predicted gene 45690 3.3219 0.0014
10 ENSMUSG00000082886 Gm5386 predicted pseudogene 5386 3.1699 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000065676 Snord42b small nucleolar RNA, C/D box 42B -1.5569 0.0000
50853 ENSMUSG00000106475 Gm43011 predicted gene 43011 -1.5531 0.0000
50852 ENSMUSG00000096932 5033403F01Rik RIKEN cDNA 5033403F01 gene -1.5487 0.0000
50851 ENSMUSG00000021432 Slc35b3 solute carrier family 35, member B3 -1.5487 0.0000
50850 ENSMUSG00000008384 Sertad1 SERTA domain containing 1 -1.5411 0.0000
50849 ENSMUSG00000073542 Cep76 centrosomal protein 76 -1.5400 0.0000
50848 ENSMUSG00000014426 Map3k4 mitogen-activated protein kinase kinase kinase 4 -1.5337 0.0000
50847 ENSMUSG00000021690 Jmy junction-mediating and regulatory protein -1.5333 0.0000
50846 ENSMUSG00000025939 Ube2w ubiquitin-conjugating enzyme E2W (putative) -1.5331 0.0000
50845 ENSMUSG00000080006 Rps19-ps7 ribosomal protein S19, pseudogene 7 -1.5284 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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