Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1370574

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1370574 Profile download	7020001000000000000000-715	Sequence Read Archive	SRP041257	SRP041257_M44	Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity	Methylome	Embryonic stem cell	Mouse	Early embryonic tissue	Bisulfite-Seq (WGBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000082886	Gm5386	predicted pseudogene 5386	4.6439	0.0000
2	ENSMUSG00000084441	Gm26255	predicted gene, 26255	3.8074	0.0000
3	ENSMUSG00000054641	Mmrn1	multimerin 1	3.1699	0.0020
4	ENSMUSG00000078784	Rbis	ribosomal biogenesis factor	3.1699	0.0000
5	ENSMUSG00000089309	Gm24838	predicted gene, 24838	3.0222	0.0000
6	ENSMUSG00000059106	Olfr961	olfactory receptor 961	2.8074	0.0096
7	ENSMUSG00000103667	Ighv1-8	immunoglobulin heavy variable V1-8	2.8074	0.0096
8	ENSMUSG00000104152	Ighv10-4	immunoglobulin heavy variable V10-4	2.8074	0.0096
9	ENSMUSG00000040370	Etfrf1	electron transfer flavoprotein regulatory factor 1	2.7740	0.0000
10	ENSMUSG00000093385	A330044P14Rik	RIKEN cDNA A330044P14 gene	2.6610	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000107798	Gm44064	predicted gene, 44064	-0.9070	0.0000
47080	ENSMUSG00000045414	Dipk2a	divergent protein kinase domain 2A	-0.9070	0.0000
47079	ENSMUSG00000073982	Rhog	ras homolog family member G	-0.9068	0.0000
47078	ENSMUSG00000064030	Pym1	PYM homolog 1, exon junction complex associated factor	-0.9068	0.0000
47077	ENSMUSG00000041235	Chd7	chromodomain helicase DNA binding protein 7	-0.9067	0.0000
47076	ENSMUSG00000040128	Pnrc1	proline-rich nuclear receptor coactivator 1	-0.9067	0.0000
47075	ENSMUSG00000086522	Gm4473	predicted gene 4473	-0.9067	0.0000
47074	ENSMUSG00000071719	Tmem28	transmembrane protein 28	-0.9066	0.0000
47073	ENSMUSG00000038894	Irs2	insulin receptor substrate 2	-0.9066	0.0000
47072	ENSMUSG00000097615	Gm2061	predicted gene 2061	-0.9062	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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