SHOGoiN Cell Methylome: GSM1413827

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1413827


Profile download
5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M45Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS, deeper sequencing)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000103382 Gm37755 predicted gene, 37755 3.5090 0.0000
2 ENSMUSG00000073916 Olfr669 olfactory receptor 669 3.1699 0.0000
3 ENSMUSG00000075119 Olfr1197 olfactory receptor 1197 3.1699 0.0000
4 ENSMUSG00000081487 Gm13689 predicted gene 13689 3.1699 0.0000
5 ENSMUSG00000088157 Gm26351 predicted gene, 26351 3.1699 0.0000
6 ENSMUSG00000103377 Gm37180 predicted gene, 37180 3.1699 0.0000
7 ENSMUSG00000089563 Gm24667 predicted gene, 24667 3.0850 0.0000
8 ENSMUSG00000100672 Gm28404 predicted gene 28404 3.0850 0.0000
9 ENSMUSG00000063656 Gm10135 predicted gene 10135 3.0112 0.0000
10 ENSMUSG00000088268 Gm24776 predicted gene, 24776 3.0112 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000072660 Gm6288 predicted gene 6288 -2.5303 0.0000
50853 ENSMUSG00000096953 Gm26571 predicted gene, 26571 -2.5296 0.0000
50852 ENSMUSG00000111750 Gm47886 predicted gene, 47886 -2.5288 0.0000
50851 ENSMUSG00000106510 Gm18429 predicted gene, 18429 -2.5283 0.1514
50850 ENSMUSG00000103120 Gm37392 predicted gene, 37392 -2.5283 0.1504
50849 ENSMUSG00000063971 Krt88 keratin 88 -2.5274 0.0000
50848 ENSMUSG00000092371 Gm20511 predicted gene 20511 -2.5246 0.0000
50847 ENSMUSG00000043226 Olfr1009 olfactory receptor 1009 -2.5227 0.0167
50846 ENSMUSG00000087222 E030042O20Rik RIKEN cDNA E030042O20 gene -2.5223 0.0000
50845 ENSMUSG00000015839 Nfe2l2 nuclear factor, erythroid derived 2, like 2 -2.5223 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...