Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1413827

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1413827 Profile download	5030203000000000000000-761	Sequence Read Archive	SRP041257	SRP041257_M45	Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity	Methylome	Secondary oocyte (Ovarian follicle)	Mouse	Genitalia	Bisulfite-Seq (WGBS, deeper sequencing)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000103382	Gm37755	predicted gene, 37755	3.5090	0.0000
2	ENSMUSG00000073916	Olfr669	olfactory receptor 669	3.1699	0.0000
3	ENSMUSG00000075119	Olfr1197	olfactory receptor 1197	3.1699	0.0000
4	ENSMUSG00000081487	Gm13689	predicted gene 13689	3.1699	0.0000
5	ENSMUSG00000088157	Gm26351	predicted gene, 26351	3.1699	0.0000
6	ENSMUSG00000103377	Gm37180	predicted gene, 37180	3.1699	0.0000
7	ENSMUSG00000089563	Gm24667	predicted gene, 24667	3.0850	0.0000
8	ENSMUSG00000100672	Gm28404	predicted gene 28404	3.0850	0.0000
9	ENSMUSG00000063656	Gm10135	predicted gene 10135	3.0112	0.0000
47072	ENSMUSG00000091116	Gm7991	predicted gene 7991	-1.9077	0.0173

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000112468	Gm47720	predicted gene, 47720	-1.9086	0.0000
47080	ENSMUSG00000108127	Gm12845	predicted gene 12845	-1.9084	0.0000
47079	ENSMUSG00000082512	Gm13937	predicted gene 13937	-1.9082	0.0001
47078	ENSMUSG00000041120	Nbl1	NBL1, DAN family BMP antagonist	-1.9082	0.0000
47077	ENSMUSG00000089484	Gm24735	predicted gene, 24735	-1.9081	0.0000
47076	ENSMUSG00000108848	4933430N04Rik	RIKEN cDNA 4933430N04 gene	-1.9080	0.0001
47075	ENSMUSG00000097628	Gm2383	predicted gene 2383	-1.9080	0.0209
47074	ENSMUSG00000096573	1700009J07Rik	RIKEN cDNA 1700009J07 gene	-1.9079	0.0000
47073	ENSMUSG00000063704	Mapk15	mitogen-activated protein kinase 15	-1.9078	0.0000
47072	ENSMUSG00000091116	Gm7991	predicted gene 7991	-1.9077	0.0173

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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