Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1413827

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1413827


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5030203000000000000000-761Sequence Read ArchiveSRP041257SRP041257_M45Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic HeterogeneityMethylomeSecondary oocyte (Ovarian follicle)MouseGenitaliaBisulfite-Seq (WGBS, deeper sequencing)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000103382 Gm37755 predicted gene, 37755 3.5090 0.0000
2 ENSMUSG00000073916 Olfr669 olfactory receptor 669 3.1699 0.0000
3 ENSMUSG00000075119 Olfr1197 olfactory receptor 1197 3.1699 0.0000
4 ENSMUSG00000081487 Gm13689 predicted gene 13689 3.1699 0.0000
5 ENSMUSG00000088157 Gm26351 predicted gene, 26351 3.1699 0.0000
6 ENSMUSG00000103377 Gm37180 predicted gene, 37180 3.1699 0.0000
7 ENSMUSG00000089563 Gm24667 predicted gene, 24667 3.0850 0.0000
8 ENSMUSG00000100672 Gm28404 predicted gene 28404 3.0850 0.0000
9 ENSMUSG00000063656 Gm10135 predicted gene 10135 3.0112 0.0000
47072 ENSMUSG00000091116 Gm7991 predicted gene 7991 -1.9077 0.0173

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000112468 Gm47720 predicted gene, 47720 -1.9086 0.0000
47080 ENSMUSG00000108127 Gm12845 predicted gene 12845 -1.9084 0.0000
47079 ENSMUSG00000082512 Gm13937 predicted gene 13937 -1.9082 0.0001
47078 ENSMUSG00000041120 Nbl1 NBL1, DAN family BMP antagonist -1.9082 0.0000
47077 ENSMUSG00000089484 Gm24735 predicted gene, 24735 -1.9081 0.0000
47076 ENSMUSG00000108848 4933430N04Rik RIKEN cDNA 4933430N04 gene -1.9080 0.0001
47075 ENSMUSG00000097628 Gm2383 predicted gene 2383 -1.9080 0.0209
47074 ENSMUSG00000096573 1700009J07Rik RIKEN cDNA 1700009J07 gene -1.9079 0.0000
47073 ENSMUSG00000063704 Mapk15 mitogen-activated protein kinase 15 -1.9078 0.0000
47072 ENSMUSG00000091116 Gm7991 predicted gene 7991 -1.9077 0.0173

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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