SHOGoiN Cell Methylome: GSM1413827
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1413827 Profile download | 5030203000000000000000-761 | Sequence Read Archive | SRP041257 | SRP041257_M45 | Single-Cell Whole-Genome Bisulfite Sequencing for Analysis of Epigenetic Heterogeneity | Methylome | Secondary oocyte (Ovarian follicle) | Mouse | Genitalia | Bisulfite-Seq (WGBS, deeper sequencing) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000103382 | Gm37755 | predicted gene, 37755 | 3.5090 | 0.0000 |
| 2 | ENSMUSG00000073916 | Olfr669 | olfactory receptor 669 | 3.1699 | 0.0000 |
| 3 | ENSMUSG00000075119 | Olfr1197 | olfactory receptor 1197 | 3.1699 | 0.0000 |
| 4 | ENSMUSG00000081487 | Gm13689 | predicted gene 13689 | 3.1699 | 0.0000 |
| 5 | ENSMUSG00000088157 | Gm26351 | predicted gene, 26351 | 3.1699 | 0.0000 |
| 6 | ENSMUSG00000103377 | Gm37180 | predicted gene, 37180 | 3.1699 | 0.0000 |
| 7 | ENSMUSG00000089563 | Gm24667 | predicted gene, 24667 | 3.0850 | 0.0000 |
| 8 | ENSMUSG00000100672 | Gm28404 | predicted gene 28404 | 3.0850 | 0.0000 |
| 9 | ENSMUSG00000063656 | Gm10135 | predicted gene 10135 | 3.0112 | 0.0000 |
| 10 | ENSMUSG00000088268 | Gm24776 | predicted gene, 24776 | 3.0112 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000072660 | Gm6288 | predicted gene 6288 | -2.5303 | 0.0000 |
| 50853 | ENSMUSG00000096953 | Gm26571 | predicted gene, 26571 | -2.5296 | 0.0000 |
| 50852 | ENSMUSG00000111750 | Gm47886 | predicted gene, 47886 | -2.5288 | 0.0000 |
| 50851 | ENSMUSG00000106510 | Gm18429 | predicted gene, 18429 | -2.5283 | 0.1514 |
| 50850 | ENSMUSG00000103120 | Gm37392 | predicted gene, 37392 | -2.5283 | 0.1504 |
| 50849 | ENSMUSG00000063971 | Krt88 | keratin 88 | -2.5274 | 0.0000 |
| 50848 | ENSMUSG00000092371 | Gm20511 | predicted gene 20511 | -2.5246 | 0.0000 |
| 50847 | ENSMUSG00000043226 | Olfr1009 | olfactory receptor 1009 | -2.5227 | 0.0167 |
| 50846 | ENSMUSG00000087222 | E030042O20Rik | RIKEN cDNA E030042O20 gene | -2.5223 | 0.0000 |
| 50845 | ENSMUSG00000015839 | Nfe2l2 | nuclear factor, erythroid derived 2, like 2 | -2.5223 | 0.0000 |
