SHOGoiN Cell Methylome: GSM1849310
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1849310 Profile download | 5030206000000000000000-755 | Sequence Read Archive | SRP062328 | SRP062328_M6 | Human oocyte DNA methylome | Methylome | Oocyte (mature metaphase (MI) stage ) | Human | Genitalia | Bisulfite-Seq (WGBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSG00000226721 | EEF1DP2 | eukaryotic translation elongation factor 1 delta pseudogene 2 | 4.5850 | 0.0000 |
| 2 | ENSG00000269886 | NA | 4.3219 | 0.0000 | |
| 3 | ENSG00000227407 | NA | 4.1699 | 0.0000 | |
| 4 | ENSG00000254252 | RPL7P20 | ribosomal protein L7 pseudogene 20 | 4.1699 | 0.0000 |
| 5 | ENSG00000254350 | NA | 4.1699 | 0.0000 | |
| 6 | ENSG00000258719 | NA | 4.1699 | 0.0000 | |
| 7 | ENSG00000267838 | NA | 4.1699 | 0.0000 | |
| 8 | ENSG00000268496 | NA | 4.1699 | 0.0000 | |
| 9 | ENSG00000269873 | NA | 4.1699 | 0.0000 | |
| 10 | ENSG00000271239 | NA | 4.0000 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 63647 | ENSG00000102309 | PIN4 | peptidylprolyl cis/trans isomerase, NIMA-interacting 4 | -3.2218 | 0.0004 |
| 63646 | ENSG00000272734 | ADIRF-AS1 | ADIRF antisense RNA 1 | -3.2139 | 0.0014 |
| 63645 | ENSG00000284300 | NA | -3.2106 | 0.0000 | |
| 63644 | ENSG00000275206 | NA | -3.2098 | 0.1742 | |
| 63643 | ENSG00000267441 | NA | -3.2098 | 0.1742 | |
| 63642 | ENSG00000264177 | NA | -3.2098 | 0.1742 | |
| 63641 | ENSG00000263963 | MIR4461 | microRNA 4461 | -3.2019 | 0.0000 |
| 63640 | ENSG00000247627 | MTND4P12 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 pseudogene 12 | -3.2019 | 0.0000 |
| 63639 | ENSG00000242473 | KIR2DP1 | killer cell immunoglobulin like receptor, two Ig domains pseudogene 1 | -3.1924 | 0.0000 |
| 63638 | ENSG00000269028 | MTRNR2L12 | MT-RNR2-like 12 | -3.1772 | 0.0000 |
