SHOGoiN Cell Methylome: GSM1849311

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849311


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5030206000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M7Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MI) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000260171 novel transcript 7.8765 0.0000
2 ENSG00000280665 TEC 7.8329 0.0000
3 ENSG00000188691 OR56A5 olfactory receptor family 56 subfamily A member 5 7.7698 0.0000
4 ENSG00000252091 RNU6-1146P RNA, U6 small nuclear 1146, pseudogene 7.4998 0.0000
5 ENSG00000232707 AP1B1P2 AP1B1 pseudogene 2 7.4429 0.0000
6 ENSG00000237439 novel pseudogene 7.4429 0.0000
7 ENSG00000214344 OR4F13P olfactory receptor family 4 subfamily F member 13 pseudogene 7.3399 0.0000
8 ENSG00000215493 kelch-like 12 (Drosophila) (KLH12) pseudogene 7.2668 0.0000
9 ENSG00000250330 GABA(A) receptor-associated protein-like 2 (GABARAPL2 ) pseudogene 7.2288 0.0000
10 ENSG00000202324 RNA5SP366 RNA, 5S ribosomal pseudogene 366 7.1997 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000225619 MYT1L-AS1 MYT1L antisense RNA 1 -5.2599 0.0000
63340 ENSG00000234542 novel transcript -5.2521 0.0000
63339 ENSG00000255860 folate receptor 3 (gamma) (FOLR3) pseudogene -5.2500 0.0000
63338 ENSG00000274879 zinc finger protein 717 (ZNF717) pseudogene -5.2479 0.0456
63337 ENSG00000267315 ubiquitin-fold modifier 1 (UFM1) pseudogene -5.2479 0.0456
63336 ENSG00000261673 novel transcript -5.2479 0.0456
63335 ENSG00000253841 Transmembrane protein C12orf67 pseudogene -5.2479 0.0456
63334 ENSG00000250563 KNOP1P5 lysine rich nucleolar protein 1 pseudogene 5 -5.2479 0.0456
63333 ENSG00000249311 TERF1P3 telomeric repeat binding factor 1 pseudogene 3 -5.2479 0.0456
63332 ENSG00000248673 LINC01331 long intergenic non-protein coding RNA 1331 -5.2479 0.0456

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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