SHOGoiN Cell Methylome: GSM1849315

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849315


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7180101000000000000000-755Sequence Read ArchiveSRP062328SRP062328_M11Human oocyte DNA methylomeMethylomeOocyte (germinal vesicle (GV) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000201885 NA 5.3576 0.0000
2 ENSG00000281721 LINC01080 long intergenic non-protein coding RNA 1080 5.0000 0.0000
3 ENSG00000196704 AMZ2 archaelysin family metallopeptidase 2 4.8074 0.0000
4 ENSG00000249407 IL20RB-AS1 IL20RB antisense RNA 1 4.7549 0.0000
5 ENSG00000280368 tec 4.7004 0.0000
6 ENSG00000280449 tec 4.7004 0.0000
7 ENSG00000277818 NA 4.6733 0.0000
8 ENSG00000255548 novel transcript 4.6439 0.0000
9 ENSG00000255988 TUBB4BP1 tubulin beta 4B class IVb pseudogene 1 4.6439 0.0000
10 ENSG00000256079 family with sequence similarity 133, member B (FAM133B) pseudogene 4.6439 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000211826 TRDJ4 T cell receptor delta joining 4 -3.2849 0.2530
63340 ENSG00000243655 novel transcript, antisense to MTRNR2L1 -3.2823 0.0000
63339 ENSG00000180340 FZD2 frizzled class receptor 2 -3.2800 0.0060
63338 ENSG00000220556 40S ribosomal protein S2 (RPS2) pseudogene -3.2758 0.1151
63337 ENSG00000137808 novel transcript -3.2750 0.0007
63336 ENSG00000263453 NA -3.2739 0.0008
63335 ENSG00000266101 novel transcript, antisense to CACNB1 -3.2733 0.0000
63334 ENSG00000261066 novel transcript -3.2713 0.1645
63333 ENSG00000249786 EAF1-AS1 EAF1 antisense RNA 1 -3.2713 0.1076
63332 ENSG00000186008 RPS4XP21 ribosomal protein S4X pseudogene 21 -3.2713 0.0093

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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