SHOGoiN Cell Methylome: GSM1849318
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1849318 Profile download | 7180101000000000000000-755 | Sequence Read Archive | SRP062328 | SRP062328_M14 | Human oocyte DNA methylome | Methylome | Oocyte (germinal vesicle (GV) stage ) | Human | Genitalia | Bisulfite-Seq (WGBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSG00000225591 | NA | 4.7004 | 0.0000 | |
| 2 | ENSG00000275024 | NA | 4.6439 | 0.0000 | |
| 3 | ENSG00000147885 | IFNA16 | interferon alpha 16 | 4.5236 | 0.0000 |
| 4 | ENSG00000253389 | NA | 4.4594 | 0.0000 | |
| 5 | ENSG00000274705 | MIR486-1 | microRNA 486-1 | 4.4594 | 0.0000 |
| 6 | ENSG00000283450 | MIR486-2 | microRNA 486-2 | 4.4594 | 0.0000 |
| 7 | ENSG00000201431 | RNU6-1277P | RNA, U6 small nuclear 1277, pseudogene | 4.4259 | 0.0000 |
| 8 | ENSG00000235746 | CTBP2P2 | C-terminal binding protein 2 pseudogene 2 | 4.3923 | 0.0000 |
| 9 | ENSG00000251221 | LINC01337 | long intergenic non-protein coding RNA 1337 | 4.3747 | 0.0000 |
| 10 | ENSG00000228999 | NA | 4.3219 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 63647 | ENSG00000242152 | NA | -3.3219 | 1.0000 | |
| 63646 | ENSG00000240186 | RN7SL633P | RNA, 7SL, cytoplasmic 633, pseudogene | -3.3219 | 0.3931 |
| 63645 | ENSG00000237323 | NA | -3.3219 | 1.0000 | |
| 63644 | ENSG00000237311 | NA | -3.3219 | 0.3931 | |
| 63643 | ENSG00000236994 | YBX1P9 | Y-box binding protein 1 pseudogene 9 | -3.3219 | 0.0000 |
| 63642 | ENSG00000236748 | NA | -3.3219 | 0.3931 | |
| 63641 | ENSG00000236335 | NA | -3.3219 | 1.0000 | |
| 63640 | ENSG00000234851 | RPL23AP42 | ribosomal protein L23a pseudogene 42 | -3.3219 | 1.0000 |
| 63639 | ENSG00000232168 | P2RY10BP | P2Y receptor family member 10B, pseudogene | -3.3219 | 0.0091 |
| 63638 | ENSG00000231574 | LINC02015 | long intergenic non-protein coding RNA 2015 | -3.3219 | 1.0000 |
