Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1849321

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1849321 Profile download	5030203000000000000000-761	Sequence Read Archive	SRP062328	SRP062328_M17	Human oocyte DNA methylome	Methylome	Oocyte (mature metaphase (MII) stage )	Human	Genitalia	Bisulfite-Seq (WGBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSG00000183161	FANCF	FA complementation group F	5.2479	0.0000
2	ENSG00000228446	ANKRD49P1	ANKRD49 pseudogene 1	5.2479	0.0000
3	ENSG00000220804	LINC01881	long intergenic non-protein coding RNA 1881	5.1699	0.0000
4	ENSG00000224160	CICP10	capicua transcriptional repressor pseudogene 10	5.1699	0.0000
5	ENSG00000244528	SEPTIN14P2	septin 14 pseudogene 2	5.1699	0.0000
6	ENSG00000234515	PPP1R2P1	protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 1	5.1333	0.0000
7	ENSG00000163961	RNF168	ring finger protein 168	5.0330	0.0000
8	ENSG00000251350	LINC02475	long intergenic non-protein coding RNA 2475	5.0000	0.0000
9	ENSG00000229679		novel transcript	4.9843	0.0000
10	ENSG00000116014	KISS1R	KISS1 receptor	4.9069	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
63128	ENSG00000237605	DYRK3-AS1	DYRK3 antisense RNA 1	-3.4882	0.1186
63127	ENSG00000143479	DYRK3	dual specificity tyrosine phosphorylation regulated kinase 3	-3.4882	0.1186
63126	ENSG00000205784	ARRDC5	arrestin domain containing 5	-3.4856	0.0224
63125	ENSG00000260963		novel transcript	-3.4853	0.1714
63124	ENSG00000260393		novel transcript	-3.4853	0.1714
63123	ENSG00000260997		novel transcript, overlapping MYO1G	-3.4845	0.0222
63122	ENSG00000270640		novel transcript, sense intronic to FOSL2	-3.4784	0.0224
63121	ENSG00000075426	FOSL2	FOS like 2, AP-1 transcription factor subunit	-3.4784	0.0224
63120	ENSG00000252178	RNU7-69P	RNA, U7 small nuclear 69 pseudogene	-3.4773	0.2620
63119	ENSG00000201549		Y RNA	-3.4720	0.0763

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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