SHOGoiN Cell Methylome: GSM1849322
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1849322 Profile download | 5030203000000000000000-761 | Sequence Read Archive | SRP062328 | SRP062328_M18 | Human oocyte DNA methylome | Methylome | Oocyte (mature metaphase (MII) stage ) | Human | Genitalia | Bisulfite-Seq (WGBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSG00000140450 | ARRDC4 | arrestin domain containing 4 | 5.5546 | 0.0000 |
| 2 | ENSG00000254273 | NA | 5.3923 | 0.0000 | |
| 3 | ENSG00000267013 | LINC01929 | long intergenic non-protein coding RNA 1929 | 5.3923 | 0.0000 |
| 4 | ENSG00000135315 | CEP162 | centrosomal protein 162 | 5.3576 | 0.0000 |
| 5 | ENSG00000184995 | IFNE | interferon epsilon | 5.3219 | 0.0000 |
| 6 | ENSG00000210841 | RNU6ATAC26P | RNA, U6atac small nuclear 26, pseudogene | 5.3219 | 0.0000 |
| 7 | ENSG00000237927 | NA | 5.2849 | 0.0000 | |
| 8 | ENSG00000240997 | RN7SL183P | RNA, 7SL, cytoplasmic 183, pseudogene | 5.2277 | 0.0000 |
| 9 | ENSG00000134538 | SLCO1B1 | solute carrier organic anion transporter family member 1B1 | 5.1699 | 0.0000 |
| 10 | ENSG00000232719 | NA | 5.1699 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 63647 | ENSG00000168255 | POLR2J3 | RNA polymerase II subunit J3 | -4.0035 | 0.0000 |
| 63646 | ENSG00000105808 | RASA4 | RAS p21 protein activator 4 | -4.0035 | 0.0000 |
| 63645 | ENSG00000283132 | NA | -4.0000 | 0.0063 | |
| 63644 | ENSG00000278734 | NA | -4.0000 | 0.0748 | |
| 63643 | ENSG00000278265 | MIR6770-1 | microRNA 6770-1 | -4.0000 | 0.6203 |
| 63642 | ENSG00000276110 | NA | -4.0000 | 0.6203 | |
| 63641 | ENSG00000273198 | NA | -4.0000 | 0.6203 | |
| 63640 | ENSG00000270726 | NA | -4.0000 | 0.2714 | |
| 63639 | ENSG00000270052 | NA | -4.0000 | 0.6203 | |
| 63638 | ENSG00000265883 | NA | -4.0000 | 0.6203 |
