SHOGoiN Cell Methylome: GSM1849322

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849322


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5030203000000000000000-761Sequence Read ArchiveSRP062328SRP062328_M18Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MII) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000140450 ARRDC4 arrestin domain containing 4 5.5546 0.0000
2 ENSG00000254273 chromatin accessibility complex protein 1 (CHRAC1) pseudogene 5.3923 0.0000
3 ENSG00000267013 LINC01929 long intergenic non-protein coding RNA 1929 5.3923 0.0000
4 ENSG00000135315 CEP162 centrosomal protein 162 5.3576 0.0000
5 ENSG00000184995 IFNE interferon epsilon 5.3219 0.0000
6 ENSG00000210841 RNU6ATAC26P RNA, U6atac small nuclear 26, pseudogene 5.3219 0.0000
7 ENSG00000237927 novel transcript 5.2849 0.0000
8 ENSG00000240997 RN7SL183P RNA, 7SL, cytoplasmic 183, pseudogene 5.2277 0.0000
9 ENSG00000134538 SLCO1B1 solute carrier organic anion transporter family member 1B1 5.1699 0.0000
10 ENSG00000232719 novel transcript 5.1699 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000207818 MIR105-2 microRNA 105-2 -3.5850 1.0000
63340 ENSG00000207187 SNORA10B small nucleolar RNA, H/ACA box 10B -3.5850 1.0000
63339 ENSG00000207148 NA -3.5850 1.0000
63338 ENSG00000207135 RNU6-452P RNA, U6 small nuclear 452, pseudogene -3.5850 0.4008
63337 ENSG00000206931 RNU6-1042P RNA, U6 small nuclear 1042, pseudogene -3.5850 0.0736
63336 ENSG00000201443 RNU6-309P RNA, U6 small nuclear 309, pseudogene -3.5850 1.0000
63335 ENSG00000197428 OR51D1 olfactory receptor family 51 subfamily D member 1 -3.5850 1.0000
63334 ENSG00000197249 SERPINA1 serpin family A member 1 -3.5850 0.4008
63333 ENSG00000196228 SULT1C3 sulfotransferase family 1C member 3 -3.5850 1.0000
63332 ENSG00000180785 OR51E1 olfactory receptor family 51 subfamily E member 1 -3.5850 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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