SHOGoiN Cell Methylome: GSM1849323

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1849323


Profile download
5030203000000000000000-761Sequence Read ArchiveSRP062328SRP062328_M19Human oocyte DNA methylomeMethylomeOocyte (mature metaphase (MII) stage )HumanGenitaliaBisulfite-Seq (WGBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000260398 novel transcript, overlapping to PKIA 5.2089 0.0000
2 ENSG00000228509 novel transcript 5.1699 0.0000
3 ENSG00000258479 LINC00640 long intergenic non-protein coding RNA 640 5.1496 0.0000
4 ENSG00000199415 RNA5SP370 RNA, 5S ribosomal pseudogene 370 5.1293 0.0000
5 ENSG00000248968 novel transcript 4.9542 0.0000
6 ENSG00000213671 OLA1P2 OLA1 pseudogene 2 4.9069 0.0000
7 ENSG00000232713 ribosomal protein S12 (RPS12) pseudogene 4.9069 0.0000
8 ENSG00000259149 novel transcript 4.8074 0.0000
9 ENSG00000267098 novel transcript 4.8074 0.0000
10 ENSG00000226427 HMGN2P7 high mobility group nucleosomal binding domain 2 pseudogene 7 4.7680 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000264689 golgi SNAP receptor complex member 1 (GOSR1) pseudogene -3.3877 0.2620
63340 ENSG00000252892 RNU6-548P RNA, U6 small nuclear 548, pseudogene -3.3827 0.0036
63339 ENSG00000261268 novel transcript -3.3824 0.4010
63338 ENSG00000172023 REG1B regenerating family member 1 beta -3.3774 1.0000
63337 ENSG00000179213 SIGLECL1 SIGLEC family like 1 -3.3735 0.0542
63336 ENSG00000264986 MIR5092 microRNA 5092 -3.3712 0.0370
63335 ENSG00000265287 novel transcript, antisense to novel protein -3.3678 0.6442
63334 ENSG00000264608 novel transcript, sense intronic to novel protein -3.3678 0.6442
63333 ENSG00000256298 novel transcript -3.3678 0.6442
63332 ENSG00000226673 LINC01108 long intergenic non-protein coding RNA 1108 -3.3678 0.6442

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...