Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1900064-2

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1900064-2 Profile download	7020001000000000000000-715	Sequence Read Archive	SRP052901	SRP052901_M16	Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinoma	Methylome	Embryonic stem cell	Mouse	Early embryonic tissue	Bisulfite-Seq (RRBS)	HiSeq 2500	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
2	ENSMUSG00000103685	Gm37074	predicted gene, 37074	7.0334	0.0000
3	ENSMUSG00000090657	Gm8114	predicted gene 8114	6.9307	0.0000
4	ENSMUSG00000021460	Auh	AU RNA binding protein/enoyl-coenzyme A hydratase	6.7459	0.0000
5	ENSMUSG00000107907	Gm8574	predicted gene 8574	6.6629	0.0000
6	ENSMUSG00000064522	Gm26442	predicted gene, 26442	6.6534	0.0000
7	ENSMUSG00000104189	Gm37822	predicted gene, 37822	6.6534	0.0000
8	ENSMUSG00000041477	Dcp1b	decapping mRNA 1B	6.6510	0.0000
9	ENSMUSG00000059159	Gm8129	predicted pseudogene 8129	6.6439	0.0000
10	ENSMUSG00000111704	Gm47379	predicted gene, 47379	6.6294	0.0000
47072	ENSMUSG00000049532	Sall2	spalt like transcription factor 2	-4.1920	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000024335	Brd2	bromodomain containing 2	-4.1948	0.0000
47080	ENSMUSG00000059689	Zfp637	zinc finger protein 637	-4.1944	0.0000
47079	ENSMUSG00000071655	Ubxn1	UBX domain protein 1	-4.1938	0.0000
47078	ENSMUSG00000073787	Gm10575	predicted gene 10575	-4.1936	0.0000
47077	ENSMUSG00000048200	Cracr2b	calcium release activated channel regulator 2B	-4.1936	0.0000
47076	ENSMUSG00000090370	Gm21989	predicted gene 21989	-4.1935	0.0000
47075	ENSMUSG00000108719	Gm44757	predicted gene 44757	-4.1929	0.0000
47074	ENSMUSG00000015869	Prpsap1	phosphoribosyl pyrophosphate synthetase-associated protein 1	-4.1929	0.0000
47073	ENSMUSG00000035621	Midn	midnolin	-4.1922	0.0000
47072	ENSMUSG00000049532	Sall2	spalt like transcription factor 2	-4.1920	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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