Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM1900064-2

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1900064-2


Profile download
7020001000000000000000-715Sequence Read ArchiveSRP052901SRP052901_M16Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinomaMethylomeEmbryonic stem cellMouseEarly embryonic tissueBisulfite-Seq (RRBS)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
2 ENSMUSG00000103685 Gm37074 predicted gene, 37074 7.0334 0.0000
3 ENSMUSG00000090657 Gm8114 predicted gene 8114 6.9307 0.0000
4 ENSMUSG00000021460 Auh AU RNA binding protein/enoyl-coenzyme A hydratase 6.7459 0.0000
5 ENSMUSG00000107907 Gm8574 predicted gene 8574 6.6629 0.0000
6 ENSMUSG00000064522 Gm26442 predicted gene, 26442 6.6534 0.0000
7 ENSMUSG00000104189 Gm37822 predicted gene, 37822 6.6534 0.0000
8 ENSMUSG00000041477 Dcp1b decapping mRNA 1B 6.6510 0.0000
9 ENSMUSG00000059159 Gm8129 predicted pseudogene 8129 6.6439 0.0000
10 ENSMUSG00000111704 Gm47379 predicted gene, 47379 6.6294 0.0000
47072 ENSMUSG00000049532 Sall2 spalt like transcription factor 2 -4.1920 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000024335 Brd2 bromodomain containing 2 -4.1948 0.0000
47080 ENSMUSG00000059689 Zfp637 zinc finger protein 637 -4.1944 0.0000
47079 ENSMUSG00000071655 Ubxn1 UBX domain protein 1 -4.1938 0.0000
47078 ENSMUSG00000073787 Gm10575 predicted gene 10575 -4.1936 0.0000
47077 ENSMUSG00000048200 Cracr2b calcium release activated channel regulator 2B -4.1936 0.0000
47076 ENSMUSG00000090370 Gm21989 predicted gene 21989 -4.1935 0.0000
47075 ENSMUSG00000108719 Gm44757 predicted gene 44757 -4.1929 0.0000
47074 ENSMUSG00000015869 Prpsap1 phosphoribosyl pyrophosphate synthetase-associated protein 1 -4.1929 0.0000
47073 ENSMUSG00000035621 Midn midnolin -4.1922 0.0000
47072 ENSMUSG00000049532 Sall2 spalt like transcription factor 2 -4.1920 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...