SHOGoiN Cell Methylome: GSM2026493

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026493


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M1Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000091481 Gm17154 predicted gene 17154 7.6900 0.0000
2 ENSMUSG00000032750 Gab3 growth factor receptor bound protein 2-associated protein 3 7.6653 0.0000
3 ENSMUSG00000065798 Gm25518 predicted gene, 25518 7.6294 0.0000
4 ENSMUSG00000034552 Zswim2 zinc finger SWIM-type containing 2 7.6293 0.0000
5 ENSMUSG00000040537 Adam22 a disintegrin and metallopeptidase domain 22 7.2614 0.0000
6 ENSMUSG00000055069 Rab39 RAB39, member RAS oncogene family 7.2336 0.0000
7 ENSMUSG00000038279 Nop2 NOP2 nucleolar protein 7.1997 0.0000
8 ENSMUSG00000110525 Gm45893 predicted gene 45893 7.1599 0.0000
9 ENSMUSG00000088885 Gm24217 predicted gene, 24217 7.1446 0.0000
10 ENSMUSG00000073980 Gm9574 predicted gene 9574 7.1137 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000007570 Fance Fanconi anemia, complementation group E -6.1357 0.0000
50853 ENSMUSG00000022863 Btg3 B cell translocation gene 3 -6.1340 0.0000
50852 ENSMUSG00000032845 Alpk2 alpha-kinase 2 -6.1314 0.0000
50851 ENSMUSG00000036223 Ska1 spindle and kinetochore associated complex subunit 1 -6.1309 0.0000
50850 ENSMUSG00000024560 Cxxc1 CXXC finger 1 (PHD domain) -6.1309 0.0000
50849 ENSMUSG00000110282 B930086L07Rik RIKEN cDNA B930086L07 gene -6.1293 0.0064
50848 ENSMUSG00000021007 Spata7 spermatogenesis associated 7 -6.1293 0.0000
50847 ENSMUSG00000024617 Camk2a calcium/calmodulin-dependent protein kinase II alpha -6.1250 0.0000
50846 ENSMUSG00000080006 Rps19-ps7 ribosomal protein S19, pseudogene 7 -6.1159 0.0000
50845 ENSMUSG00000039033 Tasp1 taspase, threonine aspartase 1 -6.1159 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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