Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026493

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM2026493 Profile download	3150201000000000000000-189	Sequence Read Archive	SRP068012	SRP068012_M1	Simultaneous profiling of transcriptome and DNA methylome from a single cell	Methylome	Neuron (Dorsal root ganglion)	Mouse	Spinal cord	Bisulfite-Seq (RRBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000091481	Gm17154	predicted gene 17154	7.6900	0.0000
2	ENSMUSG00000032750	Gab3	growth factor receptor bound protein 2-associated protein 3	7.6653	0.0000
4	ENSMUSG00000034552	Zswim2	zinc finger SWIM-type containing 2	7.6293	0.0000
5	ENSMUSG00000040537	Adam22	a disintegrin and metallopeptidase domain 22	7.2614	0.0000
6	ENSMUSG00000055069	Rab39	RAB39, member RAS oncogene family	7.2336	0.0000
7	ENSMUSG00000038279	Nop2	NOP2 nucleolar protein	7.1997	0.0000
8	ENSMUSG00000110525	Gm45893	predicted gene 45893	7.1599	0.0000
10	ENSMUSG00000073980	Gm9574	predicted gene 9574	7.1137	0.0000
47072	ENSMUSG00000038290	Smg6	Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	-3.5238	0.0000
47073	ENSMUSG00000051518	Rps19bp1	ribosomal protein S19 binding protein 1	-3.5243	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000038836	Agbl3	ATP/GTP binding protein-like 3	-3.5276	0.0000
47080	ENSMUSG00000013150	Gfod2	glucose-fructose oxidoreductase domain containing 2	-3.5269	0.0000
47079	ENSMUSG00000045045	Lrfn4	leucine rich repeat and fibronectin type III domain containing 4	-3.5262	0.0000
47078	ENSMUSG00000027864	Ptgfrn	prostaglandin F2 receptor negative regulator	-3.5260	0.0000
47077	ENSMUSG00000057234	Mettl15	methyltransferase like 15	-3.5256	0.0000
47076	ENSMUSG00000027115	Kif18a	kinesin family member 18A	-3.5256	0.0000
47075	ENSMUSG00000065130	Gm24457	predicted gene, 24457	-3.5251	0.0000
47074	ENSMUSG00000038990	Cables2	CDK5 and Abl enzyme substrate 2	-3.5251	0.0000
47073	ENSMUSG00000051518	Rps19bp1	ribosomal protein S19 binding protein 1	-3.5243	0.0000
47072	ENSMUSG00000038290	Smg6	Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	-3.5238	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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