SHOGoiN Cell Methylome: GSM2026494

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026494


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M2Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000110725 Gm47129 predicted gene, 47129 7.1599 0.0000
2 ENSMUSG00000047749 Zc3hav1l zinc finger CCCH-type, antiviral 1-like 6.7808 0.0000
3 ENSMUSG00000110525 Gm45893 predicted gene 45893 6.7279 0.0000
4 ENSMUSG00000103017 Gm37505 predicted gene, 37505 6.6721 0.0000
5 ENSMUSG00000108149 Olfr439-ps1 olfactory receptor 439, pseudogene 1 6.5733 0.0000
6 ENSMUSG00000109847 Gm45278 predicted gene 45278 6.5685 0.0000
7 ENSMUSG00000066592 Gm7589 predicted gene 7589 6.5392 0.0000
8 ENSMUSG00000022986 Krt75 keratin 75 6.5236 0.0000
9 ENSMUSG00000100400 Gm29326 predicted gene 29326 6.4948 0.0000
10 ENSMUSG00000099197 Mir7034 microRNA 7034 6.4716 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000097699 5430400D12Rik RIKEN cDNA 5430400D12 gene -5.4594 0.0000
50853 ENSMUSG00000063801 Ap3s2 adaptor-related protein complex 3, sigma 2 subunit -5.4594 0.0005
50852 ENSMUSG00000043252 Tmem64 transmembrane protein 64 -5.4594 0.0000
50851 ENSMUSG00000032112 Trappc4 trafficking protein particle complex 4 -5.4593 0.0000
50850 ENSMUSG00000058402 Zfp420 zinc finger protein 420 -5.4553 0.0000
50849 ENSMUSG00000020598 Nrcam neuronal cell adhesion molecule -5.4533 0.0000
50848 ENSMUSG00000042810 Krba1 KRAB-A domain containing 1 -5.4517 0.0000
50847 ENSMUSG00000098178 Gm42418 predicted gene, 42418 -5.4491 0.0000
50846 ENSMUSG00000071340 Trappc3l trafficking protein particle complex 3 like -5.4478 0.0000
50845 ENSMUSG00000041632 Mrps27 mitochondrial ribosomal protein S27 -5.4476 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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