Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026494

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026494


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M2Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000110725 Gm47129 predicted gene, 47129 7.1599 0.0000
2 ENSMUSG00000047749 Zc3hav1l zinc finger CCCH-type, antiviral 1-like 6.7808 0.0000
3 ENSMUSG00000110525 Gm45893 predicted gene 45893 6.7279 0.0000
4 ENSMUSG00000103017 Gm37505 predicted gene, 37505 6.6721 0.0000
5 ENSMUSG00000108149 Olfr439-ps1 olfactory receptor 439, pseudogene 1 6.5733 0.0000
6 ENSMUSG00000109847 Gm45278 predicted gene 45278 6.5685 0.0000
7 ENSMUSG00000066592 Gm7589 predicted gene 7589 6.5392 0.0000
8 ENSMUSG00000022986 Krt75 keratin 75 6.5236 0.0000
9 ENSMUSG00000100400 Gm29326 predicted gene 29326 6.4948 0.0000
10 ENSMUSG00000099197 Mir7034 microRNA 7034 6.4716 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000062646 Ganc glucosidase, alpha; neutral C -5.1014 0.0000
50599 ENSMUSG00000033808 Tmem87a transmembrane protein 87A -5.1014 0.0000
50598 ENSMUSG00000032719 Sbspon somatomedin B and thrombospondin, type 1 domain containing -5.1001 0.0000
50597 ENSMUSG00000027230 Creb3l1 cAMP responsive element binding protein 3-like 1 -5.0972 0.0000
50596 ENSMUSG00000027162 Lin7c lin-7 homolog C (C. elegans) -5.0944 0.0000
50595 ENSMUSG00000003161 Sri sorcin -5.0936 0.0000
50594 ENSMUSG00000059674 Cdh24 cadherin-like 24 -5.0934 0.0000
50593 ENSMUSG00000056708 Ier5 immediate early response 5 -5.0904 0.0000
50592 ENSMUSG00000097383 1500026H17Rik RIKEN cDNA 1500026H17 gene -5.0895 0.0000
50591 ENSMUSG00000069539 Scyl2 SCY1-like 2 (S. cerevisiae) -5.0895 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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