SHOGoiN Cell Methylome: GSM2026495

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026495


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M3Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000109193 Gm39027 predicted gene, 39027 6.7072 0.0000
2 ENSMUSG00000084757 1700057H15Rik RIKEN cDNA 1700057H15 gene 6.6294 0.0000
3 ENSMUSG00000089105 Gm23115 predicted gene, 23115 6.6147 0.0000
4 ENSMUSG00000085284 Gm16189 predicted gene 16189 6.5236 0.0000
5 ENSMUSG00000036185 Sapcd1 suppressor APC domain containing 1 6.4757 0.0000
6 ENSMUSG00000081465 Gm12884 predicted gene 12884 6.4757 0.0000
7 ENSMUSG00000083901 Gm12885 predicted gene 12885 6.4757 0.0000
8 ENSMUSG00000083941 Gm12889 predicted gene 12889 6.4757 0.0000
9 ENSMUSG00000040540 Gm9770 predicted gene 9770 6.4739 0.0000
10 ENSMUSG00000100310 Gm19641 predicted gene, 19641 6.4178 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000085743 8430419K02Rik RIKEN cDNA 8430419K02 gene -4.8947 0.0000
50853 ENSMUSG00000106595 Gm44314 predicted gene, 44314 -4.8885 0.0000
50852 ENSMUSG00000080999 Gm11336 predicted gene 11336 -4.8885 0.0000
50851 ENSMUSG00000075031 Hist1h2bb histone cluster 1, H2bb -4.8885 0.0000
50850 ENSMUSG00000069310 Hist1h3c histone cluster 1, H3c -4.8885 0.0000
50849 ENSMUSG00000091947 6530401F13Rik RIKEN cDNA 6530401F13 gene -4.8870 0.0000
50848 ENSMUSG00000091587 Gm17191 predicted gene 17191 -4.8870 0.0000
50847 ENSMUSG00000080790 Gm7638 predicted gene 7638 -4.8863 0.0000
50846 ENSMUSG00000094445 1700015G11Rik RIKEN cDNA 1700015G11 gene -4.8854 0.0000
50845 ENSMUSG00000108678 Gm44758 predicted gene 44758 -4.8824 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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