Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026496

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM2026496 Profile download	3150201000000000000000-189	Sequence Read Archive	SRP068012	SRP068012_M4	Simultaneous profiling of transcriptome and DNA methylome from a single cell	Methylome	Neuron (Dorsal root ganglion)	Mouse	Spinal cord	Bisulfite-Seq (RRBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
2	ENSMUSG00000101102	Gm28609	predicted gene 28609	7.5774	0.0000
3	ENSMUSG00000051986	A530006G24Rik	RIKEN cDNA A530006G24 gene	7.4936	0.0000
4	ENSMUSG00000081882	Gm14294	predicted gene 14294	7.4757	0.0000
5	ENSMUSG00000100837	1700063D05Rik	RIKEN cDNA 1700063D05 gene	7.3500	0.0000
6	ENSMUSG00000029507	Pus1	pseudouridine synthase 1	7.3265	0.0000
8	ENSMUSG00000031821	Gins2	GINS complex subunit 2 (Psf2 homolog)	7.2972	0.0000
9	ENSMUSG00000097773	Gm10614	predicted gene 10614	7.2972	0.0000
10	ENSMUSG00000110239	Gm45620	predicted gene 45620	7.2961	0.0000
47072	ENSMUSG00000034928	Rnf44	ring finger protein 44	-2.7315	0.0074
47073	ENSMUSG00000039270	Megf9	multiple EGF-like-domains 9	-2.7319	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000112107	Gm47560	predicted gene, 47560	-2.7371	0.0000
47080	ENSMUSG00000092569	Gm20544	predicted gene 20544	-2.7367	0.0000
47079	ENSMUSG00000042737	Dpm3	dolichyl-phosphate mannosyltransferase polypeptide 3	-2.7364	0.0003
47078	ENSMUSG00000103640	Gm31406	predicted gene, 31406	-2.7361	0.0000
47077	ENSMUSG00000103415	Gm37339	predicted gene, 37339	-2.7344	0.0000
47076	ENSMUSG00000098562	Mir6910	microRNA 6910	-2.7341	0.0000
47075	ENSMUSG00000090860	Gm17134	predicted gene 17134	-2.7341	0.0000
47074	ENSMUSG00000070306	Ccdc153	coiled-coil domain containing 153	-2.7329	0.0000
47073	ENSMUSG00000039270	Megf9	multiple EGF-like-domains 9	-2.7319	0.0000
47072	ENSMUSG00000034928	Rnf44	ring finger protein 44	-2.7315	0.0074

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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