Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
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SHOGoiN Cell Methylome: GSM2026496
Methylation Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM2026496
Profile download
3150201000000000000000-189
Sequence Read Archive
SRP068012
SRP068012_M4
Simultaneous profiling of transcriptome and DNA methylome from a single cell
Methylome
Neuron (Dorsal root ganglion)
Mouse
Spinal cord
Bisulfite-Seq (RRBS)
HiSeq 2000
Sequence
Histogram (P-value of methylation rate)
Top 10 methylated genes
Rank
ENSG
Gene symbol
Description
M-value
P-vaue
2
ENSMUSG00000101102
Gm28609
predicted gene 28609
7.5774
0.0000
3
ENSMUSG00000051986
A530006G24Rik
RIKEN cDNA A530006G24 gene
7.4936
0.0000
4
ENSMUSG00000081882
Gm14294
predicted gene 14294
7.4757
0.0000
5
ENSMUSG00000100837
1700063D05Rik
RIKEN cDNA 1700063D05 gene
7.3500
0.0000
6
ENSMUSG00000029507
Pus1
pseudouridine synthase 1
7.3265
0.0000
8
ENSMUSG00000031821
Gins2
GINS complex subunit 2 (Psf2 homolog)
7.2972
0.0000
9
ENSMUSG00000097773
Gm10614
predicted gene 10614
7.2972
0.0000
10
ENSMUSG00000110239
Gm45620
predicted gene 45620
7.2961
0.0000
47072
ENSMUSG00000034928
Rnf44
ring finger protein 44
-2.7315
0.0074
47073
ENSMUSG00000039270
Megf9
multiple EGF-like-domains 9
-2.7319
0.0000
Bottom 10 methylated genes
Rank
ENSG
Gene symbol
Description
M-value
P-value
47081
ENSMUSG00000112107
Gm47560
predicted gene, 47560
-2.7371
0.0000
47080
ENSMUSG00000092569
Gm20544
predicted gene 20544
-2.7367
0.0000
47079
ENSMUSG00000042737
Dpm3
dolichyl-phosphate mannosyltransferase polypeptide 3
-2.7364
0.0003
47078
ENSMUSG00000103640
Gm31406
predicted gene, 31406
-2.7361
0.0000
47077
ENSMUSG00000103415
Gm37339
predicted gene, 37339
-2.7344
0.0000
47076
ENSMUSG00000098562
Mir6910
microRNA 6910
-2.7341
0.0000
47075
ENSMUSG00000090860
Gm17134
predicted gene 17134
-2.7341
0.0000
47074
ENSMUSG00000070306
Ccdc153
coiled-coil domain containing 153
-2.7329
0.0000
47073
ENSMUSG00000039270
Megf9
multiple EGF-like-domains 9
-2.7319
0.0000
47072
ENSMUSG00000034928
Rnf44
ring finger protein 44
-2.7315
0.0074
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
M-value
P-value
full
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