Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026497

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM2026497 Profile download	3150201000000000000000-189	Sequence Read Archive	SRP068012	SRP068012_M5	Simultaneous profiling of transcriptome and DNA methylome from a single cell	Methylome	Neuron (Dorsal root ganglion)	Mouse	Spinal cord	Bisulfite-Seq (RRBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000043583	4930470P17Rik	RIKEN cDNA 4930470P17 gene	8.1898	0.0000
2	ENSMUSG00000081026	Gm11855	predicted gene 11855	8.1370	0.0000
4	ENSMUSG00000093100	Mir3971	microRNA 3971	7.8138	0.0000
5	ENSMUSG00000065656	Gm23104	predicted gene, 23104	7.8009	0.0000
6	ENSMUSG00000000730	Dnmt3l	DNA (cytosine-5-)-methyltransferase 3-like	7.7814	0.0000
7	ENSMUSG00000070280	Slc22a14	solute carrier family 22 (organic cation transporter), member 14	7.7145	0.0000
8	ENSMUSG00000082924	Gm11462	predicted gene 11462	7.7091	0.0000
9	ENSMUSG00000098097	6530403H02Rik	RIKEN cDNA 6530403H02 gene	7.7074	0.0000
10	ENSMUSG00000042349	Ikbke	inhibitor of kappaB kinase epsilon	7.6935	0.0000
47072	ENSMUSG00000091890	A830073O21Rik	RIKEN cDNA A830073O21 gene	-3.8599	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000022019	Tdrd3	tudor domain containing 3	-3.8624	0.0000
47080	ENSMUSG00000042229	Rabif	RAB interacting factor	-3.8622	0.0000
47079	ENSMUSG00000022427	Tomm22	translocase of outer mitochondrial membrane 22	-3.8616	0.0000
47078	ENSMUSG00000039697	Ncoa7	nuclear receptor coactivator 7	-3.8616	0.0000
47077	ENSMUSG00000051469	Zfp24	zinc finger protein 24	-3.8616	0.0000
47076	ENSMUSG00000020770	Unk	unkempt family zinc finger	-3.8608	0.0000
47075	ENSMUSG00000020697	Lig3	ligase III, DNA, ATP-dependent	-3.8603	0.0000
47074	ENSMUSG00000020459	Mtif2	mitochondrial translational initiation factor 2	-3.8603	0.0330
47073	ENSMUSG00000030353	Tead4	TEA domain family member 4	-3.8600	0.0000
47072	ENSMUSG00000091890	A830073O21Rik	RIKEN cDNA A830073O21 gene	-3.8599	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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