SHOGoiN Cell Methylome: GSM2026498

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026498


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M6Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000032750 Gab3 growth factor receptor bound protein 2-associated protein 3 7.6865 0.0000
2 ENSMUSG00000031549 Ido2 indoleamine 2,3-dioxygenase 2 7.6366 0.0000
3 ENSMUSG00000074595 Wfdc6a WAP four-disulfide core domain 6A 7.4978 0.0000
4 ENSMUSG00000081565 Rps12-ps5 ribosomal protein S12, pseudogene 5 7.4294 0.0000
5 ENSMUSG00000101886 Gm28324 predicted gene 28324 7.4005 0.0000
6 ENSMUSG00000046721 Rpl14-ps1 ribosomal protein L14, pseudogene 1 7.3337 0.0000
7 ENSMUSG00000084466 Gm22960 predicted gene, 22960 7.3219 0.0000
8 ENSMUSG00000022546 Gpt glutamic pyruvic transaminase, soluble 7.2761 0.0000
9 ENSMUSG00000092116 Gm10320 predicted pseudogene 10320 7.2595 0.0000
10 ENSMUSG00000045345 9530056K15Rik RIKEN cDNA 9530056K15 gene 7.1396 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000092774 Gm26197 predicted gene, 26197 -5.9542 0.0000
50853 ENSMUSG00000026726 Cubn cubilin (intrinsic factor-cobalamin receptor) -5.9542 0.0139
50852 ENSMUSG00000022015 Tnfsf11 tumor necrosis factor (ligand) superfamily, member 11 -5.9542 0.0000
50851 ENSMUSG00000021877 Arf4 ADP-ribosylation factor 4 -5.9528 0.0000
50850 ENSMUSG00000097717 1700066J03Rik RIKEN cDNA 1700066J03 gene -5.9510 0.0000
50849 ENSMUSG00000098134 Rnf113a2 ring finger protein 113A2 -5.9498 0.0000
50848 ENSMUSG00000021236 Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 -5.9498 0.0000
50847 ENSMUSG00000037544 Dlgap5 DLG associated protein 5 -5.9495 0.0000
50846 ENSMUSG00000038286 Bphl biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen) -5.9483 0.0000
50845 ENSMUSG00000025240 Sacm1l SAC1 suppressor of actin mutations 1-like (yeast) -5.9414 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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