Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Methylome: GSM2026500
Methylation Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM2026500
Profile download
3150201000000000000000-189
Sequence Read Archive
SRP068012
SRP068012_M8
Simultaneous profiling of transcriptome and DNA methylome from a single cell
Methylome
Neuron (Dorsal root ganglion)
Mouse
Spinal cord
Bisulfite-Seq (RRBS)
HiSeq 2000
Sequence
Histogram (P-value of methylation rate)
Top 10 methylated genes
Rank
ENSG
Gene symbol
Description
M-value
P-vaue
1
ENSMUSG00000021716
Srek1ip1
splicing regulatory glutamine/lysine-rich protein 1interacting protein 1
9.1972
0.0000
2
ENSMUSG00000096400
Gm6098
predicted gene 6098
8.7347
0.0000
3
ENSMUSG00000029343
Crybb1
crystallin, beta B1
8.4979
0.0000
4
ENSMUSG00000066975
Cryba4
crystallin, beta A4
8.4979
0.0000
5
ENSMUSG00000086769
Gm15587
predicted gene 15587
8.4798
0.0000
6
ENSMUSG00000093759
Scarletltr
Scarletltr, erythroid developmental long intergenic non-protein coding transcript
8.4429
0.0000
7
ENSMUSG00000049410
Zfp683
zinc finger protein 683
8.4263
0.0000
8
ENSMUSG00000027006
Dnajc10
DnaJ heat shock protein family (Hsp40) member C10
8.2761
0.0000
10
ENSMUSG00000106694
Gm42894
predicted gene 42894
8.2288
0.0000
50591
ENSMUSG00000028687
Mutyh
mutY DNA glycosylase
-6.2799
0.0000
Bottom 10 methylated genes
Rank
ENSG
Gene symbol
Description
M-value
P-value
50600
ENSMUSG00000044252
Osbpl1a
oxysterol binding protein-like 1A
-6.2982
0.0000
50599
ENSMUSG00000056687
Gm11696
predicted gene 11696
-6.2913
0.0000
50598
ENSMUSG00000107194
Gm43173
predicted gene 43173
-6.2873
0.0000
50597
ENSMUSG00000058013
Septin11
septin 11
-6.2873
0.0000
50596
ENSMUSG00000093322
Gm24971
predicted gene, 24971
-6.2854
0.0000
50595
ENSMUSG00000078915
Hsp25-ps1
heat shock protein 25, pseudogene 1
-6.2854
0.0000
50594
ENSMUSG00000035203
Epn1
epsin 1
-6.2836
0.0000
50593
ENSMUSG00000080268
Brms1
breast cancer metastasis-suppressor 1
-6.2811
0.0000
50592
ENSMUSG00000028688
Toe1
target of EGR1, member 1 (nuclear)
-6.2799
0.0000
50591
ENSMUSG00000028687
Mutyh
mutY DNA glycosylase
-6.2799
0.0000
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
M-value
P-value
full
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