Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026500

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026500


Profile download
3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M8Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000021716 Srek1ip1 splicing regulatory glutamine/lysine-rich protein 1interacting protein 1 9.1972 0.0000
2 ENSMUSG00000096400 Gm6098 predicted gene 6098 8.7347 0.0000
3 ENSMUSG00000029343 Crybb1 crystallin, beta B1 8.4979 0.0000
4 ENSMUSG00000066975 Cryba4 crystallin, beta A4 8.4979 0.0000
5 ENSMUSG00000086769 Gm15587 predicted gene 15587 8.4798 0.0000
6 ENSMUSG00000093759 Scarletltr Scarletltr, erythroid developmental long intergenic non-protein coding transcript 8.4429 0.0000
7 ENSMUSG00000049410 Zfp683 zinc finger protein 683 8.4263 0.0000
8 ENSMUSG00000027006 Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 8.2761 0.0000
10 ENSMUSG00000106694 Gm42894 predicted gene 42894 8.2288 0.0000
50591 ENSMUSG00000028687 Mutyh mutY DNA glycosylase -6.2799 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50600 ENSMUSG00000044252 Osbpl1a oxysterol binding protein-like 1A -6.2982 0.0000
50599 ENSMUSG00000056687 Gm11696 predicted gene 11696 -6.2913 0.0000
50598 ENSMUSG00000107194 Gm43173 predicted gene 43173 -6.2873 0.0000
50597 ENSMUSG00000058013 Septin11 septin 11 -6.2873 0.0000
50596 ENSMUSG00000093322 Gm24971 predicted gene, 24971 -6.2854 0.0000
50595 ENSMUSG00000078915 Hsp25-ps1 heat shock protein 25, pseudogene 1 -6.2854 0.0000
50594 ENSMUSG00000035203 Epn1 epsin 1 -6.2836 0.0000
50593 ENSMUSG00000080268 Brms1 breast cancer metastasis-suppressor 1 -6.2811 0.0000
50592 ENSMUSG00000028688 Toe1 target of EGR1, member 1 (nuclear) -6.2799 0.0000
50591 ENSMUSG00000028687 Mutyh mutY DNA glycosylase -6.2799 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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