Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026500

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM2026500 Profile download	3150201000000000000000-189	Sequence Read Archive	SRP068012	SRP068012_M8	Simultaneous profiling of transcriptome and DNA methylome from a single cell	Methylome	Neuron (Dorsal root ganglion)	Mouse	Spinal cord	Bisulfite-Seq (RRBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000021716	Srek1ip1	splicing regulatory glutamine/lysine-rich protein 1interacting protein 1	9.1972	0.0000
2	ENSMUSG00000096400	Gm6098	predicted gene 6098	8.7347	0.0000
3	ENSMUSG00000029343	Crybb1	crystallin, beta B1	8.4979	0.0000
4	ENSMUSG00000066975	Cryba4	crystallin, beta A4	8.4979	0.0000
5	ENSMUSG00000086769	Gm15587	predicted gene 15587	8.4798	0.0000
6	ENSMUSG00000093759	Scarletltr	Scarletltr, erythroid developmental long intergenic non-protein coding transcript	8.4429	0.0000
7	ENSMUSG00000049410	Zfp683	zinc finger protein 683	8.4263	0.0000
8	ENSMUSG00000027006	Dnajc10	DnaJ heat shock protein family (Hsp40) member C10	8.2761	0.0000
10	ENSMUSG00000106694	Gm42894	predicted gene 42894	8.2288	0.0000
50591	ENSMUSG00000028687	Mutyh	mutY DNA glycosylase	-6.2799	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
50600	ENSMUSG00000044252	Osbpl1a	oxysterol binding protein-like 1A	-6.2982	0.0000
50599	ENSMUSG00000056687	Gm11696	predicted gene 11696	-6.2913	0.0000
50598	ENSMUSG00000107194	Gm43173	predicted gene 43173	-6.2873	0.0000
50597	ENSMUSG00000058013	Septin11	septin 11	-6.2873	0.0000
50596	ENSMUSG00000093322	Gm24971	predicted gene, 24971	-6.2854	0.0000
50595	ENSMUSG00000078915	Hsp25-ps1	heat shock protein 25, pseudogene 1	-6.2854	0.0000
50594	ENSMUSG00000035203	Epn1	epsin 1	-6.2836	0.0000
50593	ENSMUSG00000080268	Brms1	breast cancer metastasis-suppressor 1	-6.2811	0.0000
50592	ENSMUSG00000028688	Toe1	target of EGR1, member 1 (nuclear)	-6.2799	0.0000
50591	ENSMUSG00000028687	Mutyh	mutY DNA glycosylase	-6.2799	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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