SHOGoiN Cell Methylome: GSM2026502
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM2026502 Profile download | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M10 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | Methylome | Neuron (Dorsal root ganglion) | Mouse | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000110239 | Gm45620 | predicted gene 45620 | 9.1876 | 0.0000 |
| 2 | ENSMUSG00000099764 | Rps10-ps2 | ribosomal protein S10, pseudogene 2 | 9.0875 | 0.0000 |
| 3 | ENSMUSG00000102082 | Gm28675 | predicted gene 28675 | 8.8156 | 0.0000 |
| 4 | ENSMUSG00000101102 | Gm28609 | predicted gene 28609 | 8.8089 | 0.0000 |
| 5 | ENSMUSG00000077591 | Gm26016 | predicted gene, 26016 | 8.7266 | 0.0000 |
| 6 | ENSMUSG00000056824 | Zfp663 | zinc finger protein 663 | 8.6882 | 0.0000 |
| 7 | ENSMUSG00000076430 | Hus1b | HUS1 checkpoint clamp component B | 8.6049 | 0.0000 |
| 8 | ENSMUSG00000106739 | Gm43499 | predicted gene 43499 | 8.4769 | 0.0000 |
| 9 | ENSMUSG00000039934 | Gsap | gamma-secretase activating protein | 8.3685 | 0.0000 |
| 10 | ENSMUSG00000085049 | Parvaos | parvin, alpha, opposite strand | 8.3405 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000031887 | Tradd | TNFRSF1A-associated via death domain | -6.1205 | 0.0002 |
| 50853 | ENSMUSG00000030862 | Cpxm2 | carboxypeptidase X 2 (M14 family) | -6.1202 | 0.0000 |
| 50852 | ENSMUSG00000041736 | Tspo | translocator protein | -6.1196 | 0.0000 |
| 50851 | ENSMUSG00000048826 | Dact2 | dishevelled-binding antagonist of beta-catenin 2 | -6.1192 | 0.0000 |
| 50850 | ENSMUSG00000032024 | Clmp | CXADR-like membrane protein | -6.1119 | 0.0000 |
| 50849 | ENSMUSG00000098579 | Mir6937 | microRNA 6937 | -6.1085 | 0.0000 |
| 50848 | ENSMUSG00000020629 | Adi1 | acireductone dioxygenase 1 | -6.1085 | 0.0000 |
| 50847 | ENSMUSG00000056069 | Otulinl | OTU deubiquitinase with linear linkage specificity like | -6.1078 | 0.0000 |
| 50846 | ENSMUSG00000069581 | Tspear | thrombospondin type laminin G domain and EAR repeats | -6.1067 | 0.0000 |
| 50845 | ENSMUSG00000068921 | Dap3 | death associated protein 3 | -6.1021 | 0.0000 |
