Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026502

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM2026502 Profile download	3150201000000000000000-189	Sequence Read Archive	SRP068012	SRP068012_M10	Simultaneous profiling of transcriptome and DNA methylome from a single cell	Methylome	Neuron (Dorsal root ganglion)	Mouse	Spinal cord	Bisulfite-Seq (RRBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000110239	Gm45620	predicted gene 45620	9.1876	0.0000
2	ENSMUSG00000099764	Rps10-ps2	ribosomal protein S10, pseudogene 2	9.0875	0.0000
3	ENSMUSG00000102082	Gm28675	predicted gene 28675	8.8156	0.0000
4	ENSMUSG00000101102	Gm28609	predicted gene 28609	8.8089	0.0000
5	ENSMUSG00000077591	Gm26016	predicted gene, 26016	8.7266	0.0000
6	ENSMUSG00000056824	Zfp663	zinc finger protein 663	8.6882	0.0000
7	ENSMUSG00000076430	Hus1b	HUS1 checkpoint clamp component B	8.6049	0.0000
8	ENSMUSG00000106739	Gm43499	predicted gene 43499	8.4769	0.0000
9	ENSMUSG00000039934	Gsap	gamma-secretase activating protein	8.3685	0.0000
10	ENSMUSG00000085049	Parvaos	parvin, alpha, opposite strand	8.3405	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000064994	Gm22422	predicted gene, 22422	-4.0173	0.0000
47080	ENSMUSG00000026750	Psmb7	proteasome (prosome, macropain) subunit, beta type 7	-4.0172	0.0000
47079	ENSMUSG00000102909	Gm2453	predicted gene 2453	-4.0169	0.0000
47078	ENSMUSG00000030530	Furin	furin (paired basic amino acid cleaving enzyme)	-4.0168	0.0000
47077	ENSMUSG00000029111	Nelfa	negative elongation factor complex member A, Whsc2	-4.0168	0.0000
47076	ENSMUSG00000070997	1700055D18Rik	RIKEN cDNA 1700055D18 gene	-4.0168	0.0000
47075	ENSMUSG00000049657	Zbtb5	zinc finger and BTB domain containing 5	-4.0168	0.0000
47074	ENSMUSG00000062861	Zfp28	zinc finger protein 28	-4.0167	0.0000
47073	ENSMUSG00000077791	Gm25563	predicted gene, 25563	-4.0167	0.0000
47072	ENSMUSG00000044447	Dock5	dedicator of cytokinesis 5	-4.0166	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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