Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026502

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026502


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M10Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000110239 Gm45620 predicted gene 45620 9.1876 0.0000
2 ENSMUSG00000099764 Rps10-ps2 ribosomal protein S10, pseudogene 2 9.0875 0.0000
3 ENSMUSG00000102082 Gm28675 predicted gene 28675 8.8156 0.0000
4 ENSMUSG00000101102 Gm28609 predicted gene 28609 8.8089 0.0000
5 ENSMUSG00000077591 Gm26016 predicted gene, 26016 8.7266 0.0000
6 ENSMUSG00000056824 Zfp663 zinc finger protein 663 8.6882 0.0000
7 ENSMUSG00000076430 Hus1b HUS1 checkpoint clamp component B 8.6049 0.0000
8 ENSMUSG00000106739 Gm43499 predicted gene 43499 8.4769 0.0000
9 ENSMUSG00000039934 Gsap gamma-secretase activating protein 8.3685 0.0000
10 ENSMUSG00000085049 Parvaos parvin, alpha, opposite strand 8.3405 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000064994 Gm22422 predicted gene, 22422 -4.0173 0.0000
47080 ENSMUSG00000026750 Psmb7 proteasome (prosome, macropain) subunit, beta type 7 -4.0172 0.0000
47079 ENSMUSG00000102909 Gm2453 predicted gene 2453 -4.0169 0.0000
47078 ENSMUSG00000030530 Furin furin (paired basic amino acid cleaving enzyme) -4.0168 0.0000
47077 ENSMUSG00000029111 Nelfa negative elongation factor complex member A, Whsc2 -4.0168 0.0000
47076 ENSMUSG00000070997 1700055D18Rik RIKEN cDNA 1700055D18 gene -4.0168 0.0000
47075 ENSMUSG00000049657 Zbtb5 zinc finger and BTB domain containing 5 -4.0168 0.0000
47074 ENSMUSG00000062861 Zfp28 zinc finger protein 28 -4.0167 0.0000
47073 ENSMUSG00000077791 Gm25563 predicted gene, 25563 -4.0167 0.0000
47072 ENSMUSG00000044447 Dock5 dedicator of cytokinesis 5 -4.0166 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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