SHOGoiN Cell Methylome: GSM2026502

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026502


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M10Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000110239 Gm45620 predicted gene 45620 9.1876 0.0000
2 ENSMUSG00000099764 Rps10-ps2 ribosomal protein S10, pseudogene 2 9.0875 0.0000
3 ENSMUSG00000102082 Gm28675 predicted gene 28675 8.8156 0.0000
4 ENSMUSG00000101102 Gm28609 predicted gene 28609 8.8089 0.0000
5 ENSMUSG00000077591 Gm26016 predicted gene, 26016 8.7266 0.0000
6 ENSMUSG00000056824 Zfp663 zinc finger protein 663 8.6882 0.0000
7 ENSMUSG00000076430 Hus1b HUS1 checkpoint clamp component B 8.6049 0.0000
8 ENSMUSG00000106739 Gm43499 predicted gene 43499 8.4769 0.0000
9 ENSMUSG00000039934 Gsap gamma-secretase activating protein 8.3685 0.0000
10 ENSMUSG00000085049 Parvaos parvin, alpha, opposite strand 8.3405 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000031887 Tradd TNFRSF1A-associated via death domain -6.1205 0.0002
50853 ENSMUSG00000030862 Cpxm2 carboxypeptidase X 2 (M14 family) -6.1202 0.0000
50852 ENSMUSG00000041736 Tspo translocator protein -6.1196 0.0000
50851 ENSMUSG00000048826 Dact2 dishevelled-binding antagonist of beta-catenin 2 -6.1192 0.0000
50850 ENSMUSG00000032024 Clmp CXADR-like membrane protein -6.1119 0.0000
50849 ENSMUSG00000098579 Mir6937 microRNA 6937 -6.1085 0.0000
50848 ENSMUSG00000020629 Adi1 acireductone dioxygenase 1 -6.1085 0.0000
50847 ENSMUSG00000056069 Otulinl OTU deubiquitinase with linear linkage specificity like -6.1078 0.0000
50846 ENSMUSG00000069581 Tspear thrombospondin type laminin G domain and EAR repeats -6.1067 0.0000
50845 ENSMUSG00000068921 Dap3 death associated protein 3 -6.1021 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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