Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026503

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026503


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M11Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000110508 Gm8940 predicted gene 8940 8.5736 0.0000
2 ENSMUSG00000025380 Fscn2 fascin actin-bundling protein 2 8.1280 0.0000
3 ENSMUSG00000110662 Gm45722 predicted gene 45722 8.0768 0.0000
4 ENSMUSG00000105518 Gm42674 predicted gene 42674 8.0661 0.0000
5 ENSMUSG00000101729 Gm17796 predicted gene, 17796 8.0444 0.0000
6 ENSMUSG00000000730 Dnmt3l DNA (cytosine-5-)-methyltransferase 3-like 7.9944 0.0000
7 ENSMUSG00000030737 Slco2b1 solute carrier organic anion transporter family, member 2b1 7.9008 0.0000
8 ENSMUSG00000109559 Gm34280 predicted gene, 34280 7.9008 0.0000
9 ENSMUSG00000050276 Mrgprg MAS-related GPR, member G 7.8611 0.0000
10 ENSMUSG00000001020 S100a4 S100 calcium binding protein A4 7.8147 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000044024 Rell2 RELT-like 2 -3.8804 0.0000
47080 ENSMUSG00000004187 Kifc2 kinesin family member C2 -3.8800 0.0000
47079 ENSMUSG00000023000 Dhh desert hedgehog -3.8791 0.0000
47078 ENSMUSG00000042524 Sun2 Sad1 and UNC84 domain containing 2 -3.8789 0.0000
47077 ENSMUSG00000040093 Bmf BCL2 modifying factor -3.8788 0.0000
47076 ENSMUSG00000098474 Mir6919 microRNA 6919 -3.8777 0.0000
47075 ENSMUSG00000090034 Gm15917 predicted gene 15917 -3.8775 0.0000
47074 ENSMUSG00000027575 Arfgap1 ADP-ribosylation factor GTPase activating protein 1 -3.8770 0.0000
47073 ENSMUSG00000065616 Mir375 microRNA 375 -3.8760 0.0000
47072 ENSMUSG00000038618 Rassf7 Ras association (RalGDS/AF-6) domain family (N-terminal) member 7 -3.8756 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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