SHOGoiN Cell Methylome: GSM2026503
| Methylation Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM2026503 Profile download | 3150201000000000000000-189 | Sequence Read Archive | SRP068012 | SRP068012_M11 | Simultaneous profiling of transcriptome and DNA methylome from a single cell | Methylome | Neuron (Dorsal root ganglion) | Mouse | Spinal cord | Bisulfite-Seq (RRBS) | HiSeq 2000 | Sequence |
Histogram (P-value of methylation rate)
Top 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-vaue |
|---|---|---|---|---|---|
| 1 | ENSMUSG00000110508 | Gm8940 | predicted gene 8940 | 8.5736 | 0.0000 |
| 2 | ENSMUSG00000025380 | Fscn2 | fascin actin-bundling protein 2 | 8.1280 | 0.0000 |
| 3 | ENSMUSG00000110662 | Gm45722 | predicted gene 45722 | 8.0768 | 0.0000 |
| 4 | ENSMUSG00000105518 | Gm42674 | predicted gene 42674 | 8.0661 | 0.0000 |
| 5 | ENSMUSG00000101729 | Gm17796 | predicted gene, 17796 | 8.0444 | 0.0000 |
| 6 | ENSMUSG00000000730 | Dnmt3l | DNA (cytosine-5-)-methyltransferase 3-like | 7.9944 | 0.0000 |
| 7 | ENSMUSG00000030737 | Slco2b1 | solute carrier organic anion transporter family, member 2b1 | 7.9008 | 0.0000 |
| 8 | ENSMUSG00000109559 | Gm34280 | predicted gene, 34280 | 7.9008 | 0.0000 |
| 9 | ENSMUSG00000050276 | Mrgprg | MAS-related GPR, member G | 7.8611 | 0.0000 |
| 10 | ENSMUSG00000001020 | S100a4 | S100 calcium binding protein A4 | 7.8147 | 0.0000 |
Bottom 10 methylated genes
| Rank | ENSG | Gene symbol | Description | M-value | P-value |
|---|---|---|---|---|---|
| 50854 | ENSMUSG00000098944 | Mir8120 | microRNA 8120 | -6.4919 | 0.0000 |
| 50853 | ENSMUSG00000066406 | Akap13 | A kinase (PRKA) anchor protein 13 | -6.4842 | 0.0000 |
| 50852 | ENSMUSG00000106362 | Gm47279 | predicted gene, 47279 | -6.4823 | 0.0000 |
| 50851 | ENSMUSG00000105689 | Gm43120 | predicted gene 43120 | -6.4757 | 0.0000 |
| 50850 | ENSMUSG00000015971 | Actr8 | ARP8 actin-related protein 8 | -6.4757 | 0.0000 |
| 50849 | ENSMUSG00000097890 | 4930547M16Rik | RIKEN cDNA 4930547M16 gene | -6.4752 | 0.0000 |
| 50848 | ENSMUSG00000040260 | Daam2 | dishevelled associated activator of morphogenesis 2 | -6.4724 | 0.0000 |
| 50847 | ENSMUSG00000110273 | Gm41231 | predicted gene, 41231 | -6.4609 | 0.0000 |
| 50846 | ENSMUSG00000053121 | Gm5129 | predicted gene 5129 | -6.4595 | 0.0000 |
| 50845 | ENSMUSG00000097055 | Gm4419 | predicted gene 4419 | -6.4564 | 0.0000 |
