Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026503

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM2026503 Profile download	3150201000000000000000-189	Sequence Read Archive	SRP068012	SRP068012_M11	Simultaneous profiling of transcriptome and DNA methylome from a single cell	Methylome	Neuron (Dorsal root ganglion)	Mouse	Spinal cord	Bisulfite-Seq (RRBS)	HiSeq 2000	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSMUSG00000110508	Gm8940	predicted gene 8940	8.5736	0.0000
2	ENSMUSG00000025380	Fscn2	fascin actin-bundling protein 2	8.1280	0.0000
3	ENSMUSG00000110662	Gm45722	predicted gene 45722	8.0768	0.0000
4	ENSMUSG00000105518	Gm42674	predicted gene 42674	8.0661	0.0000
5	ENSMUSG00000101729	Gm17796	predicted gene, 17796	8.0444	0.0000
6	ENSMUSG00000000730	Dnmt3l	DNA (cytosine-5-)-methyltransferase 3-like	7.9944	0.0000
7	ENSMUSG00000030737	Slco2b1	solute carrier organic anion transporter family, member 2b1	7.9008	0.0000
8	ENSMUSG00000109559	Gm34280	predicted gene, 34280	7.9008	0.0000
9	ENSMUSG00000050276	Mrgprg	MAS-related GPR, member G	7.8611	0.0000
10	ENSMUSG00000001020	S100a4	S100 calcium binding protein A4	7.8147	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
47081	ENSMUSG00000044024	Rell2	RELT-like 2	-3.8804	0.0000
47080	ENSMUSG00000004187	Kifc2	kinesin family member C2	-3.8800	0.0000
47079	ENSMUSG00000023000	Dhh	desert hedgehog	-3.8791	0.0000
47078	ENSMUSG00000042524	Sun2	Sad1 and UNC84 domain containing 2	-3.8789	0.0000
47077	ENSMUSG00000040093	Bmf	BCL2 modifying factor	-3.8788	0.0000
47076	ENSMUSG00000098474	Mir6919	microRNA 6919	-3.8777	0.0000
47075	ENSMUSG00000090034	Gm15917	predicted gene 15917	-3.8775	0.0000
47074	ENSMUSG00000027575	Arfgap1	ADP-ribosylation factor GTPase activating protein 1	-3.8770	0.0000
47073	ENSMUSG00000065616	Mir375	microRNA 375	-3.8760	0.0000
47072	ENSMUSG00000038618	Rassf7	Ras association (RalGDS/AF-6) domain family (N-terminal) member 7	-3.8756	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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