SHOGoiN Cell Methylome: GSM2026503

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026503


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M11Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000110508 Gm8940 predicted gene 8940 8.5736 0.0000
2 ENSMUSG00000025380 Fscn2 fascin actin-bundling protein 2 8.1280 0.0000
3 ENSMUSG00000110662 Gm45722 predicted gene 45722 8.0768 0.0000
4 ENSMUSG00000105518 Gm42674 predicted gene 42674 8.0661 0.0000
5 ENSMUSG00000101729 Gm17796 predicted gene, 17796 8.0444 0.0000
6 ENSMUSG00000000730 Dnmt3l DNA (cytosine-5-)-methyltransferase 3-like 7.9944 0.0000
7 ENSMUSG00000030737 Slco2b1 solute carrier organic anion transporter family, member 2b1 7.9008 0.0000
8 ENSMUSG00000109559 Gm34280 predicted gene, 34280 7.9008 0.0000
9 ENSMUSG00000050276 Mrgprg MAS-related GPR, member G 7.8611 0.0000
10 ENSMUSG00000001020 S100a4 S100 calcium binding protein A4 7.8147 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000098944 Mir8120 microRNA 8120 -6.4919 0.0000
50853 ENSMUSG00000066406 Akap13 A kinase (PRKA) anchor protein 13 -6.4842 0.0000
50852 ENSMUSG00000106362 Gm47279 predicted gene, 47279 -6.4823 0.0000
50851 ENSMUSG00000105689 Gm43120 predicted gene 43120 -6.4757 0.0000
50850 ENSMUSG00000015971 Actr8 ARP8 actin-related protein 8 -6.4757 0.0000
50849 ENSMUSG00000097890 4930547M16Rik RIKEN cDNA 4930547M16 gene -6.4752 0.0000
50848 ENSMUSG00000040260 Daam2 dishevelled associated activator of morphogenesis 2 -6.4724 0.0000
50847 ENSMUSG00000110273 Gm41231 predicted gene, 41231 -6.4609 0.0000
50846 ENSMUSG00000053121 Gm5129 predicted gene 5129 -6.4595 0.0000
50845 ENSMUSG00000097055 Gm4419 predicted gene 4419 -6.4564 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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