SHOGoiN Cell Methylome: GSM2026504

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026504


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M12Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000105775 Gm10290 predicted pseudogene 10290 8.0168 0.0000
2 ENSMUSG00000088478 Mir1946b microRNA 1946b 7.8887 0.0000
3 ENSMUSG00000090381 Gm6158 predicted gene 6158 7.7549 0.0000
4 ENSMUSG00000025497 Cdhr5 cadherin-related family member 5 7.5430 0.0000
5 ENSMUSG00000037820 Tgm2 transglutaminase 2, C polypeptide 7.4696 0.0000
6 ENSMUSG00000108149 Olfr439-ps1 olfactory receptor 439, pseudogene 1 7.4512 0.0000
7 ENSMUSG00000021298 Gpr132 G protein-coupled receptor 132 7.4335 0.0000
8 ENSMUSG00000039934 Gsap gamma-secretase activating protein 7.4094 0.0000
9 ENSMUSG00000107450 Gm2522 predicted gene 2522 7.4094 0.0000
10 ENSMUSG00000102998 Gm37763 predicted gene, 37763 7.3750 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000046168 Kcnrg potassium channel regulator -6.3576 0.0000
50853 ENSMUSG00000024597 Slc12a2 solute carrier family 12, member 2 -6.3460 0.0000
50852 ENSMUSG00000021468 Sptlc1 serine palmitoyltransferase, long chain base subunit 1 -6.3446 0.0000
50851 ENSMUSG00000025724 Sec11a SEC11 homolog A, signal peptidase complex subunit -6.3399 0.0000
50850 ENSMUSG00000005681 Apoa2 apolipoprotein A-II -6.3399 0.0000
50849 ENSMUSG00000005674 Tomm40l translocase of outer mitochondrial membrane 40-like -6.3399 0.0000
50848 ENSMUSG00000020680 Taf15 TATA-box binding protein associated factor 15 -6.3372 0.0000
50847 ENSMUSG00000031575 Ash2l ASH2 like histone lysine methyltransferase complex subunit -6.3346 0.0000
50846 ENSMUSG00000049620 Prss33 protease, serine 33 -6.3335 0.0000
50845 ENSMUSG00000036676 Tmtc3 transmembrane and tetratricopeptide repeat containing 3 -6.3258 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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