SHOGoiN Cell Methylome: GSM2026505

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026505


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M13Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000065426 Mir134 microRNA 134 10.0091 0.0000
2 ENSMUSG00000065428 Mir382 microRNA 382 10.0091 0.0000
3 ENSMUSG00000065448 Mir154 microRNA 154 10.0091 0.0000
4 ENSMUSG00000070128 Mir485 microRNA 485 10.0091 0.0000
5 ENSMUSG00000070136 Mir496a microRNA 496a 10.0091 0.0000
6 ENSMUSG00000077925 Mir453 microRNA 453 10.0091 0.0000
7 ENSMUSG00000099236 Mir668 microRNA 668 10.0091 0.0000
8 ENSMUSG00000089530 Gm25163 predicted gene, 25163 9.6312 0.0000
9 ENSMUSG00000081341 Gm14891 predicted gene 14891 9.3032 0.0000
10 ENSMUSG00000026930 Gpsm1 G-protein signalling modulator 1 (AGS3-like, C. elegans) 9.2071 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
50854 ENSMUSG00000029166 Mapre3 microtubule-associated protein, RP/EB family, member 3 -7.8646 0.0000
50853 ENSMUSG00000094359 Gm25571 predicted gene, 25571 -7.8642 0.0000
50852 ENSMUSG00000033918 Parl presenilin associated, rhomboid-like -7.8620 0.0000
50851 ENSMUSG00000021978 Extl3 exostoses (multiple)-like 3 -7.8586 0.0000
50850 ENSMUSG00000097324 Carmn cardiac mesoderm enhancer-associated non-coding RNA -7.8580 0.0000
50849 ENSMUSG00000068452 Duox2 dual oxidase 2 -7.8517 0.0000
50848 ENSMUSG00000027225 Duoxa2 dual oxidase maturation factor 2 -7.8517 0.0000
50847 ENSMUSG00000105609 Gm42501 predicted gene 42501 -7.8509 0.0000
50846 ENSMUSG00000019832 Rab32 RAB32, member RAS oncogene family -7.8502 0.0000
50845 ENSMUSG00000027288 Zfp106 zinc finger protein 106 -7.8497 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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