Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2026505

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2026505


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3150201000000000000000-189Sequence Read ArchiveSRP068012SRP068012_M13Simultaneous profiling of transcriptome and DNA methylome from a single cellMethylomeNeuron (Dorsal root ganglion)MouseSpinal cordBisulfite-Seq (RRBS)HiSeq 2000Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSMUSG00000065426 Mir134 microRNA 134 10.0091 0.0000
2 ENSMUSG00000065428 Mir382 microRNA 382 10.0091 0.0000
3 ENSMUSG00000065448 Mir154 microRNA 154 10.0091 0.0000
4 ENSMUSG00000070128 Mir485 microRNA 485 10.0091 0.0000
5 ENSMUSG00000070136 Mir496a microRNA 496a 10.0091 0.0000
6 ENSMUSG00000077925 Mir453 microRNA 453 10.0091 0.0000
7 ENSMUSG00000099236 Mir668 microRNA 668 10.0091 0.0000
8 ENSMUSG00000089530 Gm25163 predicted gene, 25163 9.6312 0.0000
9 ENSMUSG00000081341 Gm14891 predicted gene 14891 9.3032 0.0000
10 ENSMUSG00000026930 Gpsm1 G-protein signalling modulator 1 (AGS3-like, C. elegans) 9.2071 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
47081 ENSMUSG00000030495 Slc7a10 solute carrier family 7 (cationic amino acid transporter, y+ system), member 10 -4.7411 0.0000
47080 ENSMUSG00000026657 Frmd4a FERM domain containing 4A -4.7401 0.0000
47079 ENSMUSG00000040850 Psme4 proteasome (prosome, macropain) activator subunit 4 -4.7399 0.0000
47078 ENSMUSG00000066894 Vsig10 V-set and immunoglobulin domain containing 10 -4.7395 0.0000
47077 ENSMUSG00000033423 Eri3 exoribonuclease 3 -4.7395 0.0000
47076 ENSMUSG00000104943 Gm42868 predicted gene 42868 -4.7392 0.0000
47075 ENSMUSG00000053957 Gm12474 predicted gene 12474 -4.7392 0.0000
47074 ENSMUSG00000044468 Tent5c terminal nucleotidyltransferase 5C -4.7392 0.0000
47073 ENSMUSG00000075054 Yae1d1 Yae1 domain containing 1 -4.7389 0.0021
47072 ENSMUSG00000073434 Wdr90 WD repeat domain 90 -4.7384 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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