Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2481534

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2481534


Profile download
7010000000000000000000-770Sequence Read ArchiveSRP074598SRP074598_M7Single-cell DNA methylome sequencing of human preimplantation embryosMethylome2-cell embryoHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000130234 ACE2 angiotensin I converting enzyme 2 2.5850 0.0002
2 ENSG00000225833 uncharacterized LOC104798195 2.5850 0.0002
3 ENSG00000229568 SMC4P1 structural maintenance of chromosomes 4 pseudogene 1 2.5850 0.0002
4 ENSG00000233716 MTFR2P1 MTFR2 pseudogene 1 2.5850 0.0002
5 ENSG00000207967 MIR620 microRNA 620 2.3219 0.0000
6 ENSG00000222054 RNA5SP177 RNA, 5S ribosomal pseudogene 177 2.3219 0.0000
7 ENSG00000231767 RPS27AP5 ribosomal protein S27a pseudogene 5 2.3219 0.0010
8 ENSG00000232273 FTH1P1 ferritin heavy chain 1 pseudogene 1 2.3219 0.0000
9 ENSG00000240759 RPS27P21 ribosomal protein S27 pseudogene 21 2.3219 0.0000
10 ENSG00000253121 novel transcript 2.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63173 ENSG00000243844 RPL17P33 ribosomal protein L17 pseudogene 33 -1.5850 1.0000
63172 ENSG00000243238 IGKV2-30 immunoglobulin kappa variable 2-30 -1.5850 0.2262
63171 ENSG00000243081 novel transcript -1.5850 0.5992
63170 ENSG00000242968 sulfotransferase family, cytosolic, 1C, member 4 (SULT1C4) pseudogene -1.5850 1.0000
63169 ENSG00000242889 RN7SL449P RNA, 7SL, cytoplasmic 449, pseudogene -1.5850 1.0000
63168 ENSG00000242638 RN7SL294P RNA, 7SL, cytoplasmic 294, pseudogene -1.5850 1.0000
63167 ENSG00000242308 pseudogene similar to methionine adenosyltransferase II, alpha (MAT2A) -1.5850 1.0000
63166 ENSG00000242280 SLC16A1P1 SLC16A1 pseudogene 1 -1.5850 0.1515
63165 ENSG00000242267 SKINT1L Skint1 like (pseudogene) -1.5850 1.0000
63164 ENSG00000242261 aurora kinase A (AURKA) pseudogene -1.5850 0.1515

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...