SHOGoiN Cell Methylome: GSM2481534

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2481534


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7010000000000000000000-770Sequence Read ArchiveSRP074598SRP074598_M7Single-cell DNA methylome sequencing of human preimplantation embryosMethylome2-cell embryoHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000130234 ACE2 angiotensin I converting enzyme 2 2.5850 0.0002
2 ENSG00000225833 novel transcript 2.5850 0.0002
3 ENSG00000229568 SMC4P1 structural maintenance of chromosomes 4 pseudogene 1 2.5850 0.0002
4 ENSG00000233716 family with sequence similarity 54, member A (FAM54A) pseudogene 2.5850 0.0002
5 ENSG00000207967 MIR620 microRNA 620 2.3219 0.0000
6 ENSG00000222054 RNA5SP177 RNA, 5S ribosomal pseudogene 177 2.3219 0.0000
7 ENSG00000231767 novel protein similar to ribosomal protein S27a RPS27A 2.3219 0.0010
8 ENSG00000232273 FTH1P1 ferritin heavy chain 1 pseudogene 1 2.3219 0.0000
9 ENSG00000240759 RPS27P21 ribosomal protein S27 pseudogene 21 2.3219 0.0000
10 ENSG00000253121 novel transcript 2.3219 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000279747 TEC -1.5850 1.0000
63340 ENSG00000279534 TEC -1.5850 1.0000
63339 ENSG00000279116 OR8D2 olfactory receptor family 8 subfamily D member 2 (gene/pseudogene) -1.5850 1.0000
63338 ENSG00000278908 TEC -1.5850 1.0000
63337 ENSG00000278650 adenosine deaminase domain containing 1 (testis-specific) (ADAD1) pseudogene -1.5850 1.0000
63336 ENSG00000278630 LINC02335 long intergenic non-protein coding RNA 2335 -1.5850 1.0000
63335 ENSG00000278552 abhydrolase domain containing 17A (ABHD17A) pseudogene -1.5850 0.2262
63334 ENSG00000278497 RN7SL759P RNA, 7SL, cytoplasmic 759, pseudogene -1.5850 0.5992
63333 ENSG00000278319 family with sequence similarity 156, member A (FAM156A) pseudogene -1.5850 0.3652
63332 ENSG00000278077 zinc finger protein 829 (ZNF829) pseudogene -1.5850 1.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

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