SHOGoiN Cell Methylome: GSM2481536

Methylation ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM2481536


Profile download
7010000000000000000000-771Sequence Read ArchiveSRP074598SRP074598_M9Single-cell DNA methylome sequencing of human preimplantation embryosMethylome4-cell embryoHumanEarly embryonic tissueBisulfite-Seq (PBAT)HiSeq 2500Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-vaue
1 ENSG00000260534 novel transcript 4.1627 0.0000
2 ENSG00000283798 MIR630 microRNA 630 4.1627 0.0000
3 ENSG00000173597 SULT1B1 sulfotransferase family 1B member 1 2.8074 0.0000
4 ENSG00000272155 novel transcript, antisense to MTFR1 2.8074 0.0000
6 ENSG00000226541 ribosomal protein L36 (RPL36) pseudogene 2.5850 0.0000
7 ENSG00000240721 RPS4XP15 ribosomal protein S4X pseudogene 15 2.5850 0.0000
8 ENSG00000243806 RPL7P18 ribosomal protein L7 pseudogene 18 2.5850 0.0000
9 ENSG00000251839 RNU7-12P RNA, U7 small nuclear 12 pseudogene 2.5850 0.0000
10 ENSG00000261630 novel transcript, antisense to FTO 2.5850 0.0000
63332 ENSG00000276631 novel transcript -2.1421 0.0000

Bottom 10 methylated genes

RankENSGGene symbolDescriptionM-valueP-value
63341 ENSG00000206190 ATP10A ATPase phospholipid transporting 10A (putative) -2.1466 0.0000
63340 ENSG00000261274 TP53TG3GP TP53 target 3 family member G, pseudogene -2.1464 0.0346
63339 ENSG00000204873 KRTAP9-3 keratin associated protein 9-3 -2.1462 0.6273
63338 ENSG00000196428 TSC22D2 TSC22 domain family member 2 -2.1455 0.0000
63337 ENSG00000176054 RPL23P2 ribosomal protein L23 pseudogene 2 -2.1454 0.0004
63336 ENSG00000196352 CD55 CD55 molecule (Cromer blood group) -2.1448 0.0000
63335 ENSG00000173227 SYT12 synaptotagmin 12 -2.1429 0.0000
63334 ENSG00000174606 ANGEL2 angel homolog 2 -2.1428 0.1223
63333 ENSG00000215906 LACTBL1 lactamase beta like 1 -2.1423 0.0000
63332 ENSG00000276631 novel transcript -2.1421 0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionM-valueP-value

full download

Now loading...