Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Methylome: GSM2481536

Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Methylation Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM2481536 Profile download	7010000000000000000000-771	Sequence Read Archive	SRP074598	SRP074598_M9	Single-cell DNA methylome sequencing of human preimplantation embryos	Methylome	4-cell embryo	Human	Early embryonic tissue	Bisulfite-Seq (PBAT)	HiSeq 2500	Sequence

Histogram (P-value of methylation rate)

Top 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-vaue
1	ENSG00000260534		novel transcript	4.1627	0.0000
2	ENSG00000283798	MIR630	microRNA 630	4.1627	0.0000
3	ENSG00000173597	SULT1B1	sulfotransferase family 1B member 1	2.8074	0.0000
4	ENSG00000272155		novel transcript, antisense to MTFR1	2.8074	0.0000
6	ENSG00000226541		ribosomal protein L36 (RPL36) pseudogene	2.5850	0.0000
7	ENSG00000240721	RPS4XP15	ribosomal protein S4X pseudogene 15	2.5850	0.0000
8	ENSG00000243806	RPL7P18	ribosomal protein L7 pseudogene 18	2.5850	0.0000
9	ENSG00000251839	RNU7-12P	RNA, U7 small nuclear 12 pseudogene	2.5850	0.0000
10	ENSG00000261630		novel transcript, antisense to FTO	2.5850	0.0000
63119	ENSG00000091651	ORC6	origin recognition complex subunit 6	-2.0556	0.0000

Bottom 10 methylated genes

Rank	ENSG	Gene symbol	Description	M-value	P-value
63128	ENSG00000264419	MIR548AC	microRNA 548ac	-2.0575	0.6273
63127	ENSG00000244122	UGT1A7	UDP glucuronosyltransferase family 1 member A7	-2.0575	0.6273
63126	ENSG00000236046		novel transcript	-2.0575	0.6273
63125	ENSG00000214743	MRPS5P3	mitochondrial ribosomal protein S5 pseudogene 3	-2.0572	0.6229
63124	ENSG00000137841	PLCB2	phospholipase C beta 2	-2.0571	0.0000
63123	ENSG00000233306	TRGV2	T cell receptor gamma variable 2	-2.0571	0.1114
63122	ENSG00000260351		novel transcript, antisense to BTBD1	-2.0566	1.0000
63121	ENSG00000201464		Y RNA	-2.0566	1.0000
63120	ENSG00000282816		novel transcript, antisense to NEFH	-2.0565	0.0000
63119	ENSG00000091651	ORC6	origin recognition complex subunit 6	-2.0556	0.0000

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	M-value	P-value

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